RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 WDR62O43379 1518 aa16.12■□□□□ 0.17
CTNND1-228ENST00000531007 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
CTNND1-228ENST00000531007 SOGA1O94964 1423 aa16.1■□□□□ 0.17
CTNND1-228ENST00000531007 KIF27Q86VH2 1401 aa16.1■□□□□ 0.17
CTNND1-228ENST00000531007 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CTNND1-228ENST00000531007 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
CTNND1-228ENST00000531007 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
CTNND1-228ENST00000531007 CUX2O14529 1486 aa16.03■□□□□ 0.16
CTNND1-228ENST00000531007 POLA2Q14181 598 aa16.02■□□□□ 0.16
CTNND1-228ENST00000531007 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.16
CTNND1-228ENST00000531007 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
CTNND1-228ENST00000531007 IFT140Q96RY7 1462 aa16■□□□□ 0.15
CTNND1-228ENST00000531007 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
CTNND1-228ENST00000531007 KIF21BO75037 1637 aa15.97■□□□□ 0.15
CTNND1-228ENST00000531007 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
CTNND1-228ENST00000531007 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
CTNND1-228ENST00000531007 GOLGA3Q08378 1498 aa15.93■□□□□ 0.14
CTNND1-228ENST00000531007 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
CTNND1-228ENST00000531007 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
CTNND1-228ENST00000531007 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
CTNND1-228ENST00000531007 IGF1RP08069 1367 aa15.91■□□□□ 0.14
CTNND1-228ENST00000531007 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
CTNND1-228ENST00000531007 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
CTNND1-228ENST00000531007 CUL7Q14999 1698 aa15.89■□□□□ 0.13
CTNND1-228ENST00000531007 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
CTNND1-228ENST00000531007 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
CTNND1-228ENST00000531007 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
CTNND1-228ENST00000531007 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
CTNND1-228ENST00000531007 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
CTNND1-228ENST00000531007 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
CTNND1-228ENST00000531007 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
CTNND1-228ENST00000531007 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
CTNND1-228ENST00000531007 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.123e-9■■■■□ 20.9
CTNND1-228ENST00000531007 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
CTNND1-228ENST00000531007 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
CTNND1-228ENST00000531007 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
CTNND1-228ENST00000531007 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
CTNND1-228ENST00000531007 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
CTNND1-228ENST00000531007 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
CTNND1-228ENST00000531007 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
CTNND1-228ENST00000531007 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
CTNND1-228ENST00000531007 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
CTNND1-228ENST00000531007 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
CTNND1-228ENST00000531007 CLIP1P30622 1438 aa15.63■□□□□ 0.09
CTNND1-228ENST00000531007 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
CTNND1-228ENST00000531007 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
CTNND1-228ENST00000531007 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
CTNND1-228ENST00000531007 FBLN2P98095 1184 aa15.57■□□□□ 0.08
CTNND1-228ENST00000531007 EFCAB5A4FU69 1503 aa15.57■□□□□ 0.08
CTNND1-228ENST00000531007 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
CTNND1-228ENST00000531007 NUP160Q12769 1436 aa15.52■□□□□ 0.08
CTNND1-228ENST00000531007 IQGAP2Q13576 1575 aa15.52■□□□□ 0.07
CTNND1-228ENST00000531007 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
CTNND1-228ENST00000531007 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
CTNND1-228ENST00000531007 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
CTNND1-228ENST00000531007 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
CTNND1-228ENST00000531007 SAMD9Q5K651 1589 aa15.47■□□□□ 0.07
CTNND1-228ENST00000531007 ARAP1Q96P48 1450 aa15.46■□□□□ 0.06
CTNND1-228ENST00000531007 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
CTNND1-228ENST00000531007 CHD1O14646 1710 aa15.43■□□□□ 0.06
CTNND1-228ENST00000531007 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
CTNND1-228ENST00000531007 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
CTNND1-228ENST00000531007 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
CTNND1-228ENST00000531007 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
CTNND1-228ENST00000531007 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
CTNND1-228ENST00000531007 MAP3K1Q13233 1512 aa15.36■□□□□ 0.05
CTNND1-228ENST00000531007 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
CTNND1-228ENST00000531007 KIAA0556O60303 1618 aa15.35■□□□□ 0.05
CTNND1-228ENST00000531007 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
CTNND1-228ENST00000531007 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
CTNND1-228ENST00000531007 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.05
CTNND1-228ENST00000531007 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
CTNND1-228ENST00000531007 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
CTNND1-228ENST00000531007 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
CTNND1-228ENST00000531007 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
CTNND1-228ENST00000531007 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
CTNND1-228ENST00000531007 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
CTNND1-228ENST00000531007 POTEHQ6S545 545 aa15.29■□□□□ 0.04
CTNND1-228ENST00000531007 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
CTNND1-228ENST00000531007 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
CTNND1-228ENST00000531007 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
CTNND1-228ENST00000531007 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
CTNND1-228ENST00000531007 HECW1Q76N89 1606 aa15.24■□□□□ 0.03
CTNND1-228ENST00000531007 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
CTNND1-228ENST00000531007 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
CTNND1-228ENST00000531007 CFAP43Q8NDM7 1665 aa15.21■□□□□ 0.03
CTNND1-228ENST00000531007 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
CTNND1-228ENST00000531007 PTPRGP23470 1445 aa15.18■□□□□ 0.02
CTNND1-228ENST00000531007 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
CTNND1-228ENST00000531007 REM2Q8IYK8 340 aaPredicted RBP15.17■□□□□ 0.02
CTNND1-228ENST00000531007 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
CTNND1-228ENST00000531007 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
CTNND1-228ENST00000531007 ABCA8O94911 1581 aa15.15■□□□□ 0.02
CTNND1-228ENST00000531007 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
CTNND1-228ENST00000531007 CDK11AQ9UQ88 783 aaPredicted RBP15.14■□□□□ 0.01
CTNND1-228ENST00000531007 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
CTNND1-228ENST00000531007 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
CTNND1-228ENST00000531007 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
CTNND1-228ENST00000531007 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
CTNND1-228ENST00000531007 NUP153P49790 1475 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms