RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
TRIM49D1-202ENST00000530311 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
TRIM49D1-202ENST00000530311 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
TRIM49D1-202ENST00000530311 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
TRIM49D1-202ENST00000530311 NESP48681 1621 aa13.39□□□□□ -0.27
TRIM49D1-202ENST00000530311 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
TRIM49D1-202ENST00000530311 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
TRIM49D1-202ENST00000530311 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
TRIM49D1-202ENST00000530311 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
TRIM49D1-202ENST00000530311 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
TRIM49D1-202ENST00000530311 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
TRIM49D1-202ENST00000530311 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
TRIM49D1-202ENST00000530311 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
TRIM49D1-202ENST00000530311 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
TRIM49D1-202ENST00000530311 TOPBP1Q92547 1522 aa13.32□□□□□ -0.28
TRIM49D1-202ENST00000530311 PCF11O94913 1555 aaKnown RBP13.32□□□□□ -0.28
TRIM49D1-202ENST00000530311 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
TRIM49D1-202ENST00000530311 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
TRIM49D1-202ENST00000530311 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
TRIM49D1-202ENST00000530311 HIRIP3Q9BW71 556 aaPredicted RBP13.28□□□□□ -0.28
TRIM49D1-202ENST00000530311 WDR97A6NE52 1622 aa13.27□□□□□ -0.28
TRIM49D1-202ENST00000530311 DDX10Q13206 875 aaKnown RBP13.27□□□□□ -0.28
TRIM49D1-202ENST00000530311 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
TRIM49D1-202ENST00000530311 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
TRIM49D1-202ENST00000530311 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
TRIM49D1-202ENST00000530311 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
TRIM49D1-202ENST00000530311 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
TRIM49D1-202ENST00000530311 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
TRIM49D1-202ENST00000530311 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
TRIM49D1-202ENST00000530311 CUL7Q14999 1698 aa13.21□□□□□ -0.29
TRIM49D1-202ENST00000530311 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.29
TRIM49D1-202ENST00000530311 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
TRIM49D1-202ENST00000530311 PPP1R15AO75807 674 aaPredicted RBP13.21□□□□□ -0.3
TRIM49D1-202ENST00000530311 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
TRIM49D1-202ENST00000530311 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
TRIM49D1-202ENST00000530311 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
TRIM49D1-202ENST00000530311 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM49D1-202ENST00000530311 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
TRIM49D1-202ENST00000530311 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
TRIM49D1-202ENST00000530311 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
TRIM49D1-202ENST00000530311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM49D1-202ENST00000530311 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
TRIM49D1-202ENST00000530311 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
TRIM49D1-202ENST00000530311 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
TRIM49D1-202ENST00000530311 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
TRIM49D1-202ENST00000530311 BCANQ96GW7 911 aa13.11□□□□□ -0.31
TRIM49D1-202ENST00000530311 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
TRIM49D1-202ENST00000530311 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
TRIM49D1-202ENST00000530311 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
TRIM49D1-202ENST00000530311 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
TRIM49D1-202ENST00000530311 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
TRIM49D1-202ENST00000530311 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
TRIM49D1-202ENST00000530311 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
TRIM49D1-202ENST00000530311 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
TRIM49D1-202ENST00000530311 NAIPQ13075 1403 aa13.09□□□□□ -0.31
TRIM49D1-202ENST00000530311 TRIM52Q96A61 297 aa13.08□□□□□ -0.31
TRIM49D1-202ENST00000530311 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.31
TRIM49D1-202ENST00000530311 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
TRIM49D1-202ENST00000530311 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
TRIM49D1-202ENST00000530311 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
TRIM49D1-202ENST00000530311 PTPN23Q9H3S7 1636 aa13.07□□□□□ -0.32
TRIM49D1-202ENST00000530311 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
TRIM49D1-202ENST00000530311 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
TRIM49D1-202ENST00000530311 ANP32CO43423 234 aa13.07□□□□□ -0.32
TRIM49D1-202ENST00000530311 FKBP8Q14318 412 aa13.07□□□□□ -0.32
TRIM49D1-202ENST00000530311 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
TRIM49D1-202ENST00000530311 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
TRIM49D1-202ENST00000530311 CCER2I3L3R5 266 aa13.04□□□□□ -0.32
TRIM49D1-202ENST00000530311 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
TRIM49D1-202ENST00000530311 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
TRIM49D1-202ENST00000530311 EHBP1L1Q8N3D4 1523 aa13□□□□□ -0.33
TRIM49D1-202ENST00000530311 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
TRIM49D1-202ENST00000530311 MYT1Q01538 1121 aa12.99□□□□□ -0.33
TRIM49D1-202ENST00000530311 FOXD1Q16676 465 aa12.99□□□□□ -0.33
TRIM49D1-202ENST00000530311 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
TRIM49D1-202ENST00000530311 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
TRIM49D1-202ENST00000530311 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
TRIM49D1-202ENST00000530311 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
TRIM49D1-202ENST00000530311 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
TRIM49D1-202ENST00000530311 KDM6BO15054 1643 aa12.97□□□□□ -0.33
TRIM49D1-202ENST00000530311 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
TRIM49D1-202ENST00000530311 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.34
TRIM49D1-202ENST00000530311 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
TRIM49D1-202ENST00000530311 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
TRIM49D1-202ENST00000530311 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
TRIM49D1-202ENST00000530311 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
TRIM49D1-202ENST00000530311 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
TRIM49D1-202ENST00000530311 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
TRIM49D1-202ENST00000530311 NEFLP07196 543 aa12.92□□□□□ -0.34
TRIM49D1-202ENST00000530311 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
TRIM49D1-202ENST00000530311 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
TRIM49D1-202ENST00000530311 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
TRIM49D1-202ENST00000530311 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
TRIM49D1-202ENST00000530311 WDR62O43379 1518 aa12.9□□□□□ -0.34
TRIM49D1-202ENST00000530311 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRIM49D1-202ENST00000530311 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM49D1-202ENST00000530311 CCDC184Q52MB2 194 aa12.88□□□□□ -0.35
TRIM49D1-202ENST00000530311 GCC2Q8IWJ2 1684 aa12.87□□□□□ -0.35
TRIM49D1-202ENST00000530311 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
TRIM49D1-202ENST00000530311 NBPF8Q3BBV2 869 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms