RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
CMTM1-214ENST00000530141 SOGA1O94964 1423 aa13.67□□□□□ -0.22
CMTM1-214ENST00000530141 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
CMTM1-214ENST00000530141 WDR97A6NE52 1622 aa13.65□□□□□ -0.22
CMTM1-214ENST00000530141 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
CMTM1-214ENST00000530141 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
CMTM1-214ENST00000530141 CUX1P39880 1505 aa13.62□□□□□ -0.23
CMTM1-214ENST00000530141 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
CMTM1-214ENST00000530141 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
CMTM1-214ENST00000530141 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
CMTM1-214ENST00000530141 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
CMTM1-214ENST00000530141 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
CMTM1-214ENST00000530141 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
CMTM1-214ENST00000530141 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
CMTM1-214ENST00000530141 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
CMTM1-214ENST00000530141 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
CMTM1-214ENST00000530141 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
CMTM1-214ENST00000530141 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
CMTM1-214ENST00000530141 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
CMTM1-214ENST00000530141 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-214ENST00000530141 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
CMTM1-214ENST00000530141 NUP160Q12769 1436 aa13.41□□□□□ -0.26
CMTM1-214ENST00000530141 TSPOAP1O95153 1857 aa13.41□□□□□ -0.26
CMTM1-214ENST00000530141 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
CMTM1-214ENST00000530141 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CMTM1-214ENST00000530141 KDM6BO15054 1643 aa13.38□□□□□ -0.27
CMTM1-214ENST00000530141 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
CMTM1-214ENST00000530141 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
CMTM1-214ENST00000530141 ABCC10Q5T3U5 1492 aa13.34□□□□□ -0.27
CMTM1-214ENST00000530141 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
CMTM1-214ENST00000530141 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
CMTM1-214ENST00000530141 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
CMTM1-214ENST00000530141 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
CMTM1-214ENST00000530141 MAPKBP1O60336 1514 aa13.28□□□□□ -0.28
CMTM1-214ENST00000530141 EEA1Q15075 1411 aa13.27□□□□□ -0.29
CMTM1-214ENST00000530141 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
CMTM1-214ENST00000530141 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
CMTM1-214ENST00000530141 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
CMTM1-214ENST00000530141 HECW2Q9P2P5 1572 aa13.23□□□□□ -0.29
CMTM1-214ENST00000530141 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
CMTM1-214ENST00000530141 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
CMTM1-214ENST00000530141 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
CMTM1-214ENST00000530141 JPH4Q96JJ6 628 aa13.22□□□□□ -0.29
CMTM1-214ENST00000530141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
CMTM1-214ENST00000530141 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
CMTM1-214ENST00000530141 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
CMTM1-214ENST00000530141 TTBK1Q5TCY1 1321 aaPredicted RBP13.18□□□□□ -0.3
CMTM1-214ENST00000530141 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
CMTM1-214ENST00000530141 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-214ENST00000530141 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
CMTM1-214ENST00000530141 ZBTB22O15209 634 aa13.14□□□□□ -0.31
CMTM1-214ENST00000530141 CUL7Q14999 1698 aa13.14□□□□□ -0.31
CMTM1-214ENST00000530141 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-214ENST00000530141 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-214ENST00000530141 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-214ENST00000530141 APLP2Q06481 763 aa13.11□□□□□ -0.31
CMTM1-214ENST00000530141 CAPN15O75808 1086 aa13.08□□□□□ -0.32
CMTM1-214ENST00000530141 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
CMTM1-214ENST00000530141 ABCC2Q92887 1545 aa13.08□□□□□ -0.32
CMTM1-214ENST00000530141 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
CMTM1-214ENST00000530141 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
CMTM1-214ENST00000530141 GLI2P10070 1586 aa13.03□□□□□ -0.32
CMTM1-214ENST00000530141 MAP3K4Q9Y6R4 1608 aa13.03□□□□□ -0.32
CMTM1-214ENST00000530141 PTPRGP23470 1445 aa13.02□□□□□ -0.33
CMTM1-214ENST00000530141 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
CMTM1-214ENST00000530141 KIF21BO75037 1637 aa13□□□□□ -0.33
CMTM1-214ENST00000530141 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
CMTM1-214ENST00000530141 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
CMTM1-214ENST00000530141 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
CMTM1-214ENST00000530141 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
CMTM1-214ENST00000530141 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
CMTM1-214ENST00000530141 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-214ENST00000530141 DSG3P32926 999 aa12.95□□□□□ -0.34
CMTM1-214ENST00000530141 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CMTM1-214ENST00000530141 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
CMTM1-214ENST00000530141 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
CMTM1-214ENST00000530141 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
CMTM1-214ENST00000530141 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
CMTM1-214ENST00000530141 TEX14Q8IWB6 1497 aa12.91□□□□□ -0.34
CMTM1-214ENST00000530141 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
CMTM1-214ENST00000530141 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
CMTM1-214ENST00000530141 CARMIL2Q6F5E8 1435 aa12.89□□□□□ -0.35
CMTM1-214ENST00000530141 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
CMTM1-214ENST00000530141 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
CMTM1-214ENST00000530141 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
CMTM1-214ENST00000530141 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
CMTM1-214ENST00000530141 KIAA0556O60303 1618 aa12.86□□□□□ -0.35
CMTM1-214ENST00000530141 WDR7Q9Y4E6 1490 aa12.85□□□□□ -0.35
CMTM1-214ENST00000530141 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
CMTM1-214ENST00000530141 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
CMTM1-214ENST00000530141 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.35
CMTM1-214ENST00000530141 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
CMTM1-214ENST00000530141 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
CMTM1-214ENST00000530141 ADAMTSL3P82987 1691 aa12.81□□□□□ -0.36
CMTM1-214ENST00000530141 ABCB7O75027 752 aa12.81□□□□□ -0.36
CMTM1-214ENST00000530141 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
CMTM1-214ENST00000530141 PTPRMP28827 1452 aa12.8□□□□□ -0.36
CMTM1-214ENST00000530141 LMTK3Q96Q04 1460 aa12.8□□□□□ -0.36
CMTM1-214ENST00000530141 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
CMTM1-214ENST00000530141 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms