RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	SYNJ2	O15056	1496 aa		13.09	□□□□□ -0.31
MS4A6A-208	ENST00000528851	IGF1R	P08069	1367 aa		13.08	□□□□□ -0.32
MS4A6A-208	ENST00000528851	ERICH3	Q5RHP9	1530 aa		13.08	□□□□□ -0.32
MS4A6A-208	ENST00000528851	FHAD1	B1AJZ9	1412 aa		13.06	□□□□□ -0.32
MS4A6A-208	ENST00000528851	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
MS4A6A-208	ENST00000528851	POTEH	Q6S545	545 aa		13.04	□□□□□ -0.32
MS4A6A-208	ENST00000528851	PBRM1	Q86U86	1689 aa		13.02	□□□□□ -0.32
MS4A6A-208	ENST00000528851	NCBP3	Q53F19	620 aa	Known RBP	12.99	□□□□□ -0.33
MS4A6A-208	ENST00000528851	CARMIL1	Q5VZK9	1371 aa		12.99	□□□□□ -0.33
MS4A6A-208	ENST00000528851	GRIN2A	Q12879	1464 aa		12.98	□□□□□ -0.33
MS4A6A-208	ENST00000528851	CHD1	O14646	1710 aa		12.98	□□□□□ -0.33
MS4A6A-208	ENST00000528851	ADAMTS12	P58397	1594 aa		12.97	□□□□□ -0.33
MS4A6A-208	ENST00000528851	RUSC2	Q8N2Y8	1516 aa		12.96	□□□□□ -0.34
MS4A6A-208	ENST00000528851	NUP160	Q12769	1436 aa		12.95	□□□□□ -0.34
MS4A6A-208	ENST00000528851	CSRNP3	Q8WYN3	585 aa		12.95	□□□□□ -0.34
MS4A6A-208	ENST00000528851	CUL7	Q14999	1698 aa		12.92	□□□□□ -0.34
MS4A6A-208	ENST00000528851	CLASP1	Q7Z460	1538 aa		12.91	□□□□□ -0.34
MS4A6A-208	ENST00000528851	EEA1	Q15075	1411 aa		12.91	□□□□□ -0.34
MS4A6A-208	ENST00000528851	JPH4	Q96JJ6	628 aa		12.9	□□□□□ -0.34
MS4A6A-208	ENST00000528851	RAPGEF2	Q9Y4G8	1499 aa		12.89	□□□□□ -0.35
MS4A6A-208	ENST00000528851	ARHGEF11	O15085	1522 aa		12.87	□□□□□ -0.35
MS4A6A-208	ENST00000528851	CEP170	Q5SW79	1584 aa		12.87	□□□□□ -0.35
MS4A6A-208	ENST00000528851	KIAA0586	Q9BVV6	1533 aa		12.87	□□□□□ -0.35
MS4A6A-208	ENST00000528851	PRX	Q9BXM0	1461 aa		12.86	□□□□□ -0.35
MS4A6A-208	ENST00000528851	CYB5RL	Q6IPT4	315 aa		12.85	□□□□□ -0.35
MS4A6A-208	ENST00000528851	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.83	□□□□□ -0.35
MS4A6A-208	ENST00000528851	RIMBP3C	A6NJZ7	1639 aa		12.83	□□□□□ -0.36
MS4A6A-208	ENST00000528851	RIMBP3B	A6NNM3	1639 aa		12.83	□□□□□ -0.36
MS4A6A-208	ENST00000528851	RIMBP3	Q9UFD9	1639 aa		12.83	□□□□□ -0.36
MS4A6A-208	ENST00000528851	PRG4	Q92954	1404 aa	Predicted RBP	12.8	□□□□□ -0.36
MS4A6A-208	ENST00000528851	SHROOM2	Q13796	1616 aa		12.78	□□□□□ -0.36
MS4A6A-208	ENST00000528851	ARAP1	Q96P48	1450 aa		12.77	□□□□□ -0.36
MS4A6A-208	ENST00000528851	CARMIL2	Q6F5E8	1435 aa		12.75	□□□□□ -0.37
MS4A6A-208	ENST00000528851	DSG3	P32926	999 aa		12.74	□□□□□ -0.37
MS4A6A-208	ENST00000528851	IQGAP2	Q13576	1575 aa		12.72	□□□□□ -0.37
MS4A6A-208	ENST00000528851	ERCC6L2	Q5T890	1561 aa		12.71	□□□□□ -0.37
MS4A6A-208	ENST00000528851	TNIK	Q9UKE5	1360 aa		12.7	□□□□□ -0.38
MS4A6A-208	ENST00000528851	UGGT2	Q9NYU1	1516 aa		12.7	□□□□□ -0.38
MS4A6A-208	ENST00000528851	PTPRG	P23470	1445 aa		12.69	□□□□□ -0.38
MS4A6A-208	ENST00000528851	UBTF	P17480	764 aa	Known RBP	12.69	□□□□□ -0.38
MS4A6A-208	ENST00000528851	CAPN15	O75808	1086 aa		12.68	□□□□□ -0.38
MS4A6A-208	ENST00000528851		U3KPZ7	1027 aa	Predicted RBP	12.68	□□□□□ -0.38
MS4A6A-208	ENST00000528851	KIF21B	O75037	1637 aa		12.68	□□□□□ -0.38
MS4A6A-208	ENST00000528851	GOLGA3	Q08378	1498 aa		12.67	□□□□□ -0.38
MS4A6A-208	ENST00000528851	DISP1	Q96F81	1524 aa		12.66	□□□□□ -0.38
MS4A6A-208	ENST00000528851	NPM3	O75607	178 aa	Known RBP	12.65	□□□□□ -0.38
MS4A6A-208	ENST00000528851	NPM1	P06748	294 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
MS4A6A-208	ENST00000528851	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.63	□□□□□ -0.39
MS4A6A-208	ENST00000528851	CTTNBP2	Q8WZ74	1663 aa		12.62	□□□□□ -0.39
MS4A6A-208	ENST00000528851	EHMT2	Q96KQ7	1210 aa		12.62	□□□□□ -0.39
MS4A6A-208	ENST00000528851	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.6	□□□□□ -0.39
MS4A6A-208	ENST00000528851	P3H3	Q8IVL6	736 aa		12.6	□□□□□ -0.39
MS4A6A-208	ENST00000528851	UACA	Q9BZF9	1416 aa		12.6	□□□□□ -0.39
MS4A6A-208	ENST00000528851	KIAA0556	O60303	1618 aa		12.59	□□□□□ -0.39
MS4A6A-208	ENST00000528851	RANGAP1	P46060	587 aa	Predicted RBP	12.58	□□□□□ -0.4
MS4A6A-208	ENST00000528851	UHRF1BP1L	A0JNW5	1464 aa		12.57	□□□□□ -0.4
MS4A6A-208	ENST00000528851	TRH	P20396	242 aa	Predicted RBP	12.56	□□□□□ -0.4
MS4A6A-208	ENST00000528851	SAMD9	Q5K651	1589 aa		12.53	□□□□□ -0.4
MS4A6A-208	ENST00000528851	APLP2	Q06481	763 aa		12.52	□□□□□ -0.41
MS4A6A-208	ENST00000528851	ABCC2	Q92887	1545 aa		12.52	□□□□□ -0.41
MS4A6A-208	ENST00000528851	EFCAB5	A4FU69	1503 aa		12.51	□□□□□ -0.41
MS4A6A-208	ENST00000528851	ADCY10	Q96PN6	1610 aa		12.51	□□□□□ -0.41
MS4A6A-208	ENST00000528851	PLB1	Q6P1J6	1458 aa		12.49	□□□□□ -0.41
MS4A6A-208	ENST00000528851	LOC105371045	A0A1W2PR82	267 aa		12.49	□□□□□ -0.41
MS4A6A-208	ENST00000528851	KDM5B	Q9UGL1	1544 aa		12.49	□□□□□ -0.41
MS4A6A-208	ENST00000528851	FHOD3	Q2V2M9	1422 aa		12.48	□□□□□ -0.41
MS4A6A-208	ENST00000528851	ABCA8	O94911	1581 aa		12.48	□□□□□ -0.41
MS4A6A-208	ENST00000528851	ARHGAP35	Q9NRY4	1499 aa		12.48	□□□□□ -0.41
MS4A6A-208	ENST00000528851	MAPKBP1	O60336	1514 aa		12.48	□□□□□ -0.41
MS4A6A-208	ENST00000528851	FAM69C	Q0P6D2	419 aa		12.46	□□□□□ -0.41
MS4A6A-208	ENST00000528851	FMN1	Q68DA7	1419 aa		12.46	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ABCC10	Q5T3U5	1492 aa		12.45	□□□□□ -0.42
MS4A6A-208	ENST00000528851	CLIP1	P30622	1438 aa		12.44	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ASXL2	Q76L83	1435 aa		12.44	□□□□□ -0.42
MS4A6A-208	ENST00000528851	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.43	□□□□□ -0.42
MS4A6A-208	ENST00000528851	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.43	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ATP10B	O94823	1461 aa		12.43	□□□□□ -0.42
MS4A6A-208	ENST00000528851	PLEKHD1	A6NEE1	506 aa		12.41	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.41	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.4	□□□□□ -0.42
MS4A6A-208	ENST00000528851	RAPGEF6	Q8TEU7	1601 aa		12.4	□□□□□ -0.42
MS4A6A-208	ENST00000528851	ARID3C	A6NKF2	412 aa		12.39	□□□□□ -0.43
MS4A6A-208	ENST00000528851	KCNH8	Q96L42	1107 aa		12.39	□□□□□ -0.43
MS4A6A-208	ENST00000528851	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.39	□□□□□ -0.43
MS4A6A-208	ENST00000528851	NUP153	P49790	1475 aa	Known RBP	12.39	□□□□□ -0.43
MS4A6A-208	ENST00000528851	ZCCHC11	Q5TAX3	1644 aa	Known RBP	12.38	□□□□□ -0.43
MS4A6A-208	ENST00000528851	WDR7	Q9Y4E6	1490 aa		12.37	□□□□□ -0.43
MS4A6A-208	ENST00000528851	CEP162	Q5TB80	1403 aa		12.37	□□□□□ -0.43
MS4A6A-208	ENST00000528851	EPRS	P07814	1512 aa	Known RBP	12.37	□□□□□ -0.43
MS4A6A-208	ENST00000528851	GLI2	P10070	1586 aa		12.35	□□□□□ -0.43
MS4A6A-208	ENST00000528851	CASKIN1	Q8WXD9	1431 aa		12.35	□□□□□ -0.43
MS4A6A-208	ENST00000528851	DIP2B	Q9P265	1576 aa		12.35	□□□□□ -0.43
MS4A6A-208	ENST00000528851	RBM42	Q9BTD8	480 aa	Known RBP	12.31	□□□□□ -0.44
MS4A6A-208	ENST00000528851	HECW1	Q76N89	1606 aa		12.31	□□□□□ -0.44
MS4A6A-208	ENST00000528851	KIF13A	Q9H1H9	1805 aa		12.3	□□□□□ -0.44
MS4A6A-208	ENST00000528851	CD109	Q6YHK3	1445 aa		12.3	□□□□□ -0.44
MS4A6A-208	ENST00000528851	FYCO1	Q9BQS8	1478 aa		12.28	□□□□□ -0.44
MS4A6A-208	ENST00000528851	CCDC18	Q5T9S5	1454 aa		12.28	□□□□□ -0.44
MS4A6A-208	ENST00000528851	CDK13	Q14004	1512 aa	Known RBP	12.27	□□□□□ -0.45
MS4A6A-208	ENST00000528851	MAGI3	Q5TCQ9	1506 aa		12.26	□□□□□ -0.45

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