RNA–Protein interactions for RNA: ENST00000528727.5

CNTN5-210, Transcript of contactin 5, humanhuman

TSL 1 (best)

Gene CNTN5, Length 3,144 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN5-210ENST00000528727 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
CNTN5-210ENST00000528727 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
CNTN5-210ENST00000528727 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
CNTN5-210ENST00000528727 GRIN2BQ13224 1484 aa12.46□□□□□ -0.41
CNTN5-210ENST00000528727 MIER1Q8N108 512 aa12.46□□□□□ -0.42
CNTN5-210ENST00000528727 EEA1Q15075 1411 aa12.45□□□□□ -0.42
CNTN5-210ENST00000528727 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
CNTN5-210ENST00000528727 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
CNTN5-210ENST00000528727 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
CNTN5-210ENST00000528727 IGF1RP08069 1367 aa12.42□□□□□ -0.42
CNTN5-210ENST00000528727 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
CNTN5-210ENST00000528727 ABCA5Q8WWZ7 1642 aa12.41□□□□□ -0.42
CNTN5-210ENST00000528727 CARMIL1Q5VZK9 1371 aa12.41□□□□□ -0.42
CNTN5-210ENST00000528727 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
CNTN5-210ENST00000528727 ERICH3Q5RHP9 1530 aa12.38□□□□□ -0.43
CNTN5-210ENST00000528727 RANGAP1P46060 587 aaPredicted RBP12.37□□□□□ -0.43
CNTN5-210ENST00000528727 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
CNTN5-210ENST00000528727 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
CNTN5-210ENST00000528727 CLIP1P30622 1438 aa12.34□□□□□ -0.43
CNTN5-210ENST00000528727 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
CNTN5-210ENST00000528727 RAPGEF2Q9Y4G8 1499 aa12.33□□□□□ -0.44
CNTN5-210ENST00000528727 KIF21BO75037 1637 aa12.32□□□□□ -0.44
CNTN5-210ENST00000528727 CUL7Q14999 1698 aa12.32□□□□□ -0.44
CNTN5-210ENST00000528727 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
CNTN5-210ENST00000528727 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
CNTN5-210ENST00000528727 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
CNTN5-210ENST00000528727 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
CNTN5-210ENST00000528727 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
CNTN5-210ENST00000528727 GRIN2AQ12879 1464 aa12.29□□□□□ -0.44
CNTN5-210ENST00000528727 CHD1O14646 1710 aa12.26□□□□□ -0.45
CNTN5-210ENST00000528727 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CNTN5-210ENST00000528727 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
CNTN5-210ENST00000528727 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
CNTN5-210ENST00000528727 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
CNTN5-210ENST00000528727 NUP160Q12769 1436 aa12.18□□□□□ -0.46
CNTN5-210ENST00000528727 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
CNTN5-210ENST00000528727 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
CNTN5-210ENST00000528727 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
CNTN5-210ENST00000528727 IQGAP2Q13576 1575 aa12.14□□□□□ -0.47
CNTN5-210ENST00000528727 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
CNTN5-210ENST00000528727 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
CNTN5-210ENST00000528727 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
CNTN5-210ENST00000528727 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
CNTN5-210ENST00000528727 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
CNTN5-210ENST00000528727 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
CNTN5-210ENST00000528727 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
CNTN5-210ENST00000528727 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
CNTN5-210ENST00000528727 FHOD3Q2V2M9 1422 aa12.06□□□□□ -0.48
CNTN5-210ENST00000528727 RRBP1Q9P2E9 1410 aaKnown RBP12.06□□□□□ -0.48
CNTN5-210ENST00000528727 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
CNTN5-210ENST00000528727 ARID3CA6NKF2 412 aa12.04□□□□□ -0.48
CNTN5-210ENST00000528727 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
CNTN5-210ENST00000528727 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
CNTN5-210ENST00000528727 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CNTN5-210ENST00000528727 PTPRGP23470 1445 aa12.03□□□□□ -0.48
CNTN5-210ENST00000528727 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
CNTN5-210ENST00000528727 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
CNTN5-210ENST00000528727 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
CNTN5-210ENST00000528727 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
CNTN5-210ENST00000528727 ARHGEF11O15085 1522 aa12.01□□□□□ -0.49
CNTN5-210ENST00000528727 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
CNTN5-210ENST00000528727 CCNB3Q8WWL7 1395 aa12□□□□□ -0.49
CNTN5-210ENST00000528727 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
CNTN5-210ENST00000528727 KIAA0556O60303 1618 aa12□□□□□ -0.49
CNTN5-210ENST00000528727 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
CNTN5-210ENST00000528727 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
CNTN5-210ENST00000528727 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
CNTN5-210ENST00000528727 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
CNTN5-210ENST00000528727 RAB3GAP2Q9H2M9 1393 aa11.96□□□□□ -0.49
CNTN5-210ENST00000528727 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.5
CNTN5-210ENST00000528727 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
CNTN5-210ENST00000528727 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
CNTN5-210ENST00000528727 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
CNTN5-210ENST00000528727 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
CNTN5-210ENST00000528727 BCANQ96GW7 911 aa11.94□□□□□ -0.5
CNTN5-210ENST00000528727 PLB1Q6P1J6 1458 aa11.93□□□□□ -0.5
CNTN5-210ENST00000528727 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
CNTN5-210ENST00000528727 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
CNTN5-210ENST00000528727 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
CNTN5-210ENST00000528727 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
CNTN5-210ENST00000528727 FKBP8Q14318 412 aa11.88□□□□□ -0.51
CNTN5-210ENST00000528727 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
CNTN5-210ENST00000528727 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
CNTN5-210ENST00000528727 SETD5Q9C0A6 1442 aa11.87□□□□□ -0.51
CNTN5-210ENST00000528727 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
CNTN5-210ENST00000528727 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
CNTN5-210ENST00000528727 PCF11O94913 1555 aaKnown RBP11.86□□□□□ -0.51
CNTN5-210ENST00000528727 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
CNTN5-210ENST00000528727 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
CNTN5-210ENST00000528727 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
CNTN5-210ENST00000528727 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
CNTN5-210ENST00000528727 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
CNTN5-210ENST00000528727 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
CNTN5-210ENST00000528727 LRRC9Q6ZRR7 1453 aa11.84□□□□□ -0.51
CNTN5-210ENST00000528727 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
CNTN5-210ENST00000528727 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
CNTN5-210ENST00000528727 ABCA8O94911 1581 aa11.82□□□□□ -0.52
CNTN5-210ENST00000528727 CDK13Q14004 1512 aaKnown RBP11.82□□□□□ -0.52
CNTN5-210ENST00000528727 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
CNTN5-210ENST00000528727 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms