RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
MACF1-228ENST00000528611 CARMIL1Q5VZK9 1371 aa10.24□□□□□ -0.77
MACF1-228ENST00000528611 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
MACF1-228ENST00000528611 RNF216Q9NWF9 866 aaPredicted RBP10.22□□□□□ -0.77
MACF1-228ENST00000528611 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
MACF1-228ENST00000528611 RAPGEF2Q9Y4G8 1499 aa10.21□□□□□ -0.78
MACF1-228ENST00000528611 RUSC2Q8N2Y8 1516 aa10.21□□□□□ -0.78
MACF1-228ENST00000528611 ADAMTS12P58397 1594 aa10.21□□□□□ -0.78
MACF1-228ENST00000528611 KIF21BO75037 1637 aa10.2□□□□□ -0.78
MACF1-228ENST00000528611 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
MACF1-228ENST00000528611 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
MACF1-228ENST00000528611 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
MACF1-228ENST00000528611 GOLGA3Q08378 1498 aa10.15□□□□□ -0.78
MACF1-228ENST00000528611 NUP160Q12769 1436 aa10.15□□□□□ -0.79
MACF1-228ENST00000528611 OSCARQ8IYS5 282 aa10.14□□□□□ -0.79
MACF1-228ENST00000528611 KIAA0586Q9BVV6 1533 aa10.12□□□□□ -0.79
MACF1-228ENST00000528611 CHD1O14646 1710 aa10.1□□□□□ -0.79
MACF1-228ENST00000528611 FBLN2P98095 1184 aa10.09□□□□□ -0.79
MACF1-228ENST00000528611 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
MACF1-228ENST00000528611 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
MACF1-228ENST00000528611 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
MACF1-228ENST00000528611 CTTNBP2Q8WZ74 1663 aa10.06□□□□□ -0.8
MACF1-228ENST00000528611 CEP170Q5SW79 1584 aa10.05□□□□□ -0.8
MACF1-228ENST00000528611 IQGAP2Q13576 1575 aa10.05□□□□□ -0.8
MACF1-228ENST00000528611 UGGT2Q9NYU1 1516 aa10.04□□□□□ -0.8
MACF1-228ENST00000528611 UBTFP17480 764 aaKnown RBP10.04□□□□□ -0.8
MACF1-228ENST00000528611 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
MACF1-228ENST00000528611 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
MACF1-228ENST00000528611 CARMIL2Q6F5E8 1435 aa10.02□□□□□ -0.81
MACF1-228ENST00000528611 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.81
MACF1-228ENST00000528611 SAMD9Q5K651 1589 aa9.97□□□□□ -0.81
MACF1-228ENST00000528611 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.82
MACF1-228ENST00000528611 DISP1Q96F81 1524 aa9.95□□□□□ -0.82
MACF1-228ENST00000528611 CLIP1P30622 1438 aa9.94□□□□□ -0.82
MACF1-228ENST00000528611 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
MACF1-228ENST00000528611 KIAA0556O60303 1618 aa9.93□□□□□ -0.82
MACF1-228ENST00000528611 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
MACF1-228ENST00000528611 LOC105371045A0A1W2PR82 267 aa9.93□□□□□ -0.82
MACF1-228ENST00000528611 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
MACF1-228ENST00000528611 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
MACF1-228ENST00000528611 ARHGEF11O15085 1522 aa9.91□□□□□ -0.82
MACF1-228ENST00000528611 PTPRGP23470 1445 aa9.9□□□□□ -0.83
MACF1-228ENST00000528611 UHRF1BP1LA0JNW5 1464 aa9.89□□□□□ -0.83
MACF1-228ENST00000528611 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
MACF1-228ENST00000528611 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
MACF1-228ENST00000528611 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
MACF1-228ENST00000528611 ARAP1Q96P48 1450 aa9.85□□□□□ -0.83
MACF1-228ENST00000528611 UACAQ9BZF9 1416 aa9.85□□□□□ -0.83
MACF1-228ENST00000528611 VPS8Q8N3P4 1428 aa9.84□□□□□ -0.83
MACF1-228ENST00000528611 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
MACF1-228ENST00000528611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
MACF1-228ENST00000528611 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
MACF1-228ENST00000528611 MAP3K1Q13233 1512 aa9.83□□□□□ -0.84
MACF1-228ENST00000528611 FYCO1Q9BQS8 1478 aa9.83□□□□□ -0.84
MACF1-228ENST00000528611 ABCA8O94911 1581 aa9.83□□□□□ -0.84
MACF1-228ENST00000528611 ERCC6L2Q5T890 1561 aa9.83□□□□□ -0.84
MACF1-228ENST00000528611 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
MACF1-228ENST00000528611 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
MACF1-228ENST00000528611 CCDC18Q5T9S5 1454 aa9.81□□□□□ -0.84
MACF1-228ENST00000528611 RAPGEF6Q8TEU7 1601 aa9.81□□□□□ -0.84
MACF1-228ENST00000528611 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
MACF1-228ENST00000528611 NCBP3Q53F19 620 aaKnown RBP9.8□□□□□ -0.84
MACF1-228ENST00000528611 CDK11AQ9UQ88 783 aaPredicted RBP9.8□□□□□ -0.84
MACF1-228ENST00000528611 HECW1Q76N89 1606 aa9.8□□□□□ -0.84
MACF1-228ENST00000528611 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
MACF1-228ENST00000528611 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
MACF1-228ENST00000528611 PLB1Q6P1J6 1458 aa9.78□□□□□ -0.84
MACF1-228ENST00000528611 RANGAP1P46060 587 aaPredicted RBP9.77□□□□□ -0.85
MACF1-228ENST00000528611 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
MACF1-228ENST00000528611 POTEHQ6S545 545 aa9.77□□□□□ -0.85
MACF1-228ENST00000528611 NUP153P49790 1475 aaKnown RBP9.77□□□□□ -0.85
MACF1-228ENST00000528611 APLP2Q06481 763 aa9.76□□□□□ -0.85
MACF1-228ENST00000528611 EPRSP07814 1512 aaKnown RBP9.76□□□□□ -0.85
MACF1-228ENST00000528611 MAPKBP1O60336 1514 aa9.75□□□□□ -0.85
MACF1-228ENST00000528611 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
MACF1-228ENST00000528611 ATP10BO94823 1461 aa9.74□□□□□ -0.85
MACF1-228ENST00000528611 PCF11O94913 1555 aaKnown RBP9.74□□□□□ -0.85
MACF1-228ENST00000528611 PLEKHD1A6NEE1 506 aa9.73□□□□□ -0.85
MACF1-228ENST00000528611 TIAM1Q13009 1591 aa9.71□□□□□ -0.86
MACF1-228ENST00000528611 ZCCHC11Q5TAX3 1644 aaKnown RBP9.7□□□□□ -0.86
MACF1-228ENST00000528611 TROQ12816 1431 aaPredicted RBP9.69□□□□□ -0.86
MACF1-228ENST00000528611 CFAP43Q8NDM7 1665 aa9.69□□□□□ -0.86
MACF1-228ENST00000528611 EHBP1L1Q8N3D4 1523 aa9.68□□□□□ -0.86
MACF1-228ENST00000528611 WDR7Q9Y4E6 1490 aa9.68□□□□□ -0.86
MACF1-228ENST00000528611 TTBK1Q5TCY1 1321 aaPredicted RBP9.68□□□□□ -0.86
MACF1-228ENST00000528611 LRRC9Q6ZRR7 1453 aa9.67□□□□□ -0.86
MACF1-228ENST00000528611 ASXL2Q76L83 1435 aa9.67□□□□□ -0.86
MACF1-228ENST00000528611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.67□□□□□ -0.86
MACF1-228ENST00000528611 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
MACF1-228ENST00000528611 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
MACF1-228ENST00000528611 GLI2P10070 1586 aa9.67□□□□□ -0.86
MACF1-228ENST00000528611 MTUS2Q5JR59 1369 aa9.66□□□□□ -0.86
MACF1-228ENST00000528611 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
MACF1-228ENST00000528611 ARAP3Q8WWN8 1544 aa9.65□□□□□ -0.86
MACF1-228ENST00000528611 ABCC10Q5T3U5 1492 aa9.65□□□□□ -0.87
MACF1-228ENST00000528611 PHLDB1Q86UU1 1377 aa9.64□□□□□ -0.87
MACF1-228ENST00000528611 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
MACF1-228ENST00000528611 DSG3P32926 999 aa9.64□□□□□ -0.87
MACF1-228ENST00000528611 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
MACF1-228ENST00000528611 KIF14Q15058 1648 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms