RNA–Protein interactions for RNA: ENST00000527356.1

CCDC84-204, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-204ENST00000527356 IGF1RP08069 1367 aa12.74□□□□□ -0.37
CCDC84-204ENST00000527356 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
CCDC84-204ENST00000527356 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
CCDC84-204ENST00000527356 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.38
CCDC84-204ENST00000527356 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
CCDC84-204ENST00000527356 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
CCDC84-204ENST00000527356 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
CCDC84-204ENST00000527356 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
CCDC84-204ENST00000527356 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
CCDC84-204ENST00000527356 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
CCDC84-204ENST00000527356 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
CCDC84-204ENST00000527356 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
CCDC84-204ENST00000527356 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
CCDC84-204ENST00000527356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC84-204ENST00000527356 PHLDB1Q86UU1 1377 aa12.62□□□□□ -0.39
CCDC84-204ENST00000527356 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
CCDC84-204ENST00000527356 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
CCDC84-204ENST00000527356 ITGAEP38570 1179 aa12.61□□□□□ -0.39
CCDC84-204ENST00000527356 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■■■■■ 35.5
CCDC84-204ENST00000527356 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
CCDC84-204ENST00000527356 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
CCDC84-204ENST00000527356 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
CCDC84-204ENST00000527356 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
CCDC84-204ENST00000527356 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
CCDC84-204ENST00000527356 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
CCDC84-204ENST00000527356 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
CCDC84-204ENST00000527356 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
CCDC84-204ENST00000527356 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
CCDC84-204ENST00000527356 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
CCDC84-204ENST00000527356 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
CCDC84-204ENST00000527356 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
CCDC84-204ENST00000527356 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
CCDC84-204ENST00000527356 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
CCDC84-204ENST00000527356 DNMBPQ6XZF7 1577 aa12.49□□□□□ -0.41
CCDC84-204ENST00000527356 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CCDC84-204ENST00000527356 CUL7Q14999 1698 aa12.48□□□□□ -0.41
CCDC84-204ENST00000527356 FHOD3Q2V2M9 1422 aa12.47□□□□□ -0.41
CCDC84-204ENST00000527356 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
CCDC84-204ENST00000527356 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.41
CCDC84-204ENST00000527356 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
CCDC84-204ENST00000527356 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
CCDC84-204ENST00000527356 POLA1P09884 1462 aaPredicted RBP12.44□□□□□ -0.42
CCDC84-204ENST00000527356 SNAPC4Q5SXM2 1469 aa12.44□□□□□ -0.42
CCDC84-204ENST00000527356 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
CCDC84-204ENST00000527356 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
CCDC84-204ENST00000527356 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
CCDC84-204ENST00000527356 UACAQ9BZF9 1416 aa12.43□□□□□ -0.42
CCDC84-204ENST00000527356 ANP32CO43423 234 aa12.43□□□□□ -0.42
CCDC84-204ENST00000527356 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
CCDC84-204ENST00000527356 FKBP8Q14318 412 aa12.41□□□□□ -0.42
CCDC84-204ENST00000527356 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
CCDC84-204ENST00000527356 TONSLQ96HA7 1378 aa12.4□□□□□ -0.43
CCDC84-204ENST00000527356 PTPN23Q9H3S7 1636 aa12.39□□□□□ -0.43
CCDC84-204ENST00000527356 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
CCDC84-204ENST00000527356 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
CCDC84-204ENST00000527356 PTPRKQ15262 1439 aa12.39□□□□□ -0.43
CCDC84-204ENST00000527356 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
CCDC84-204ENST00000527356 NAIPQ13075 1403 aa12.37□□□□□ -0.43
CCDC84-204ENST00000527356 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
CCDC84-204ENST00000527356 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
CCDC84-204ENST00000527356 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
CCDC84-204ENST00000527356 NEFLP07196 543 aa12.36□□□□□ -0.43
CCDC84-204ENST00000527356 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
CCDC84-204ENST00000527356 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
CCDC84-204ENST00000527356 ARHGEF11O15085 1522 aa12.34□□□□□ -0.43
CCDC84-204ENST00000527356 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
CCDC84-204ENST00000527356 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
CCDC84-204ENST00000527356 BCANQ96GW7 911 aa12.33□□□□□ -0.44
CCDC84-204ENST00000527356 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
CCDC84-204ENST00000527356 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
CCDC84-204ENST00000527356 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
CCDC84-204ENST00000527356 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
CCDC84-204ENST00000527356 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
CCDC84-204ENST00000527356 AKNAQ7Z591 1439 aa12.31□□□□□ -0.44
CCDC84-204ENST00000527356 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
CCDC84-204ENST00000527356 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
CCDC84-204ENST00000527356 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
CCDC84-204ENST00000527356 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
CCDC84-204ENST00000527356 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
CCDC84-204ENST00000527356 NESP48681 1621 aa12.28□□□□□ -0.44
CCDC84-204ENST00000527356 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
CCDC84-204ENST00000527356 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
CCDC84-204ENST00000527356 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
CCDC84-204ENST00000527356 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
CCDC84-204ENST00000527356 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
CCDC84-204ENST00000527356 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
CCDC84-204ENST00000527356 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
CCDC84-204ENST00000527356 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
CCDC84-204ENST00000527356 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
CCDC84-204ENST00000527356 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
CCDC84-204ENST00000527356 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
CCDC84-204ENST00000527356 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
CCDC84-204ENST00000527356 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC84-204ENST00000527356 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
CCDC84-204ENST00000527356 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC84-204ENST00000527356 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
CCDC84-204ENST00000527356 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
CCDC84-204ENST00000527356 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
CCDC84-204ENST00000527356 RRP7BPQ9NSQ0 103 aa12.18□□□□□ -0.46
CCDC84-204ENST00000527356 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms