RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
COMMD9-204ENST00000526789 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
COMMD9-204ENST00000526789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
COMMD9-204ENST00000526789 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
COMMD9-204ENST00000526789 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
COMMD9-204ENST00000526789 TOPBP1Q92547 1522 aa13.46□□□□□ -0.25
COMMD9-204ENST00000526789 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
COMMD9-204ENST00000526789 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
COMMD9-204ENST00000526789 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-204ENST00000526789 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
COMMD9-204ENST00000526789 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
COMMD9-204ENST00000526789 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
COMMD9-204ENST00000526789 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
COMMD9-204ENST00000526789 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
COMMD9-204ENST00000526789 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
COMMD9-204ENST00000526789 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
COMMD9-204ENST00000526789 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
COMMD9-204ENST00000526789 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
COMMD9-204ENST00000526789 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
COMMD9-204ENST00000526789 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
COMMD9-204ENST00000526789 POLA2Q14181 598 aa13.29□□□□□ -0.28
COMMD9-204ENST00000526789 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
COMMD9-204ENST00000526789 SOGA1O94964 1423 aa13.28□□□□□ -0.28
COMMD9-204ENST00000526789 HAX1O00165 279 aa13.26□□□□□ -0.29
COMMD9-204ENST00000526789 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
COMMD9-204ENST00000526789 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
COMMD9-204ENST00000526789 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
COMMD9-204ENST00000526789 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
COMMD9-204ENST00000526789 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
COMMD9-204ENST00000526789 GRIN2BQ13224 1484 aa13.18□□□□□ -0.3
COMMD9-204ENST00000526789 SYNJ2O15056 1496 aa13.17□□□□□ -0.3
COMMD9-204ENST00000526789 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
COMMD9-204ENST00000526789 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
COMMD9-204ENST00000526789 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-204ENST00000526789 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
COMMD9-204ENST00000526789 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
COMMD9-204ENST00000526789 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
COMMD9-204ENST00000526789 CUX1P39880 1505 aa13.05□□□□□ -0.32
COMMD9-204ENST00000526789 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
COMMD9-204ENST00000526789 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
COMMD9-204ENST00000526789 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
COMMD9-204ENST00000526789 EVX2Q03828 476 aa13.03□□□□□ -0.32
COMMD9-204ENST00000526789 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.32
COMMD9-204ENST00000526789 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
COMMD9-204ENST00000526789 GRIN2AQ12879 1464 aa13□□□□□ -0.33
COMMD9-204ENST00000526789 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
COMMD9-204ENST00000526789 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
COMMD9-204ENST00000526789 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
COMMD9-204ENST00000526789 KDM6BO15054 1643 aa12.95□□□□□ -0.34
COMMD9-204ENST00000526789 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
COMMD9-204ENST00000526789 TSPOAP1O95153 1857 aa12.94□□□□□ -0.34
COMMD9-204ENST00000526789 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-204ENST00000526789 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
COMMD9-204ENST00000526789 NUP160Q12769 1436 aa12.91□□□□□ -0.34
COMMD9-204ENST00000526789 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
COMMD9-204ENST00000526789 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
COMMD9-204ENST00000526789 ABCC10Q5T3U5 1492 aa12.9□□□□□ -0.34
COMMD9-204ENST00000526789 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
COMMD9-204ENST00000526789 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
COMMD9-204ENST00000526789 FKBP8Q14318 412 aa12.89□□□□□ -0.35
COMMD9-204ENST00000526789 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
COMMD9-204ENST00000526789 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
COMMD9-204ENST00000526789 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
COMMD9-204ENST00000526789 LHX8Q68G74 356 aa12.83□□□□□ -0.36
COMMD9-204ENST00000526789 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
COMMD9-204ENST00000526789 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
COMMD9-204ENST00000526789 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
COMMD9-204ENST00000526789 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
COMMD9-204ENST00000526789 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
COMMD9-204ENST00000526789 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
COMMD9-204ENST00000526789 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
COMMD9-204ENST00000526789 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-204ENST00000526789 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
COMMD9-204ENST00000526789 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
COMMD9-204ENST00000526789 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
COMMD9-204ENST00000526789 PTPRGP23470 1445 aa12.69□□□□□ -0.38
COMMD9-204ENST00000526789 GABBR2O75899 941 aa12.67□□□□□ -0.38
COMMD9-204ENST00000526789 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
COMMD9-204ENST00000526789 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
COMMD9-204ENST00000526789 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
COMMD9-204ENST00000526789 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
COMMD9-204ENST00000526789 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
COMMD9-204ENST00000526789 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
COMMD9-204ENST00000526789 CUL7Q14999 1698 aa12.62□□□□□ -0.39
COMMD9-204ENST00000526789 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
COMMD9-204ENST00000526789 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
COMMD9-204ENST00000526789 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
COMMD9-204ENST00000526789 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
COMMD9-204ENST00000526789 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
COMMD9-204ENST00000526789 GLI2P10070 1586 aa12.58□□□□□ -0.4
COMMD9-204ENST00000526789 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
COMMD9-204ENST00000526789 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
COMMD9-204ENST00000526789 EPRSP07814 1512 aaKnown RBP12.54□□□□□ -0.4
COMMD9-204ENST00000526789 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
COMMD9-204ENST00000526789 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
COMMD9-204ENST00000526789 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
COMMD9-204ENST00000526789 MAP3K4Q9Y6R4 1608 aa12.52□□□□□ -0.4
COMMD9-204ENST00000526789 IGF1RP08069 1367 aa12.52□□□□□ -0.41
COMMD9-204ENST00000526789 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
COMMD9-204ENST00000526789 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms