RNA–Protein interactions for RNA: ENST00000526677.1

MS4A6A-205, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 2,416 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-205ENST00000526677 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
MS4A6A-205ENST00000526677 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
MS4A6A-205ENST00000526677 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
MS4A6A-205ENST00000526677 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
MS4A6A-205ENST00000526677 BCANQ96GW7 911 aa13.84□□□□□ -0.19
MS4A6A-205ENST00000526677 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
MS4A6A-205ENST00000526677 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.19
MS4A6A-205ENST00000526677 CCER2I3L3R5 266 aa13.83□□□□□ -0.2
MS4A6A-205ENST00000526677 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.2
MS4A6A-205ENST00000526677 CUX1P39880 1505 aa13.82□□□□□ -0.2
MS4A6A-205ENST00000526677 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
MS4A6A-205ENST00000526677 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
MS4A6A-205ENST00000526677 ITGAEP38570 1179 aa13.79□□□□□ -0.2
MS4A6A-205ENST00000526677 NEFLP07196 543 aa13.77□□□□□ -0.21
MS4A6A-205ENST00000526677 HMGXB3Q12766 1538 aa13.76□□□□□ -0.21
MS4A6A-205ENST00000526677 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
MS4A6A-205ENST00000526677 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
MS4A6A-205ENST00000526677 PHLDB1Q86UU1 1377 aa13.73□□□□□ -0.21
MS4A6A-205ENST00000526677 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
MS4A6A-205ENST00000526677 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
MS4A6A-205ENST00000526677 TRIM52Q96A61 297 aa13.71□□□□□ -0.21
MS4A6A-205ENST00000526677 MSH5O43196 834 aa13.7□□□□□ -0.22
MS4A6A-205ENST00000526677 ANP32CO43423 234 aa13.7□□□□□ -0.22
MS4A6A-205ENST00000526677 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
MS4A6A-205ENST00000526677 IGF1RP08069 1367 aa13.69□□□□□ -0.22
MS4A6A-205ENST00000526677 FANCIQ9NVI1 1328 aa13.68□□□□□ -0.22
MS4A6A-205ENST00000526677 CFTRP13569 1480 aa13.68□□□□□ -0.22
MS4A6A-205ENST00000526677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.68□□□□□ -0.22
MS4A6A-205ENST00000526677 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
MS4A6A-205ENST00000526677 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
MS4A6A-205ENST00000526677 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
MS4A6A-205ENST00000526677 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
MS4A6A-205ENST00000526677 PCF11O94913 1555 aaKnown RBP13.61□□□□□ -0.23
MS4A6A-205ENST00000526677 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
MS4A6A-205ENST00000526677 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
MS4A6A-205ENST00000526677 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
MS4A6A-205ENST00000526677 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
MS4A6A-205ENST00000526677 KDM5BQ9UGL1 1544 aa13.56□□□□□ -0.24
MS4A6A-205ENST00000526677 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
MS4A6A-205ENST00000526677 FYCO1Q9BQS8 1478 aa13.56□□□□□ -0.24
MS4A6A-205ENST00000526677 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
MS4A6A-205ENST00000526677 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
MS4A6A-205ENST00000526677 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
MS4A6A-205ENST00000526677 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
MS4A6A-205ENST00000526677 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
MS4A6A-205ENST00000526677 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
MS4A6A-205ENST00000526677 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
MS4A6A-205ENST00000526677 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
MS4A6A-205ENST00000526677 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
MS4A6A-205ENST00000526677 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
MS4A6A-205ENST00000526677 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
MS4A6A-205ENST00000526677 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
MS4A6A-205ENST00000526677 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
MS4A6A-205ENST00000526677 PTPRKQ15262 1439 aa13.5□□□□□ -0.25
MS4A6A-205ENST00000526677 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
MS4A6A-205ENST00000526677 NESP48681 1621 aa13.49□□□□□ -0.25
MS4A6A-205ENST00000526677 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
MS4A6A-205ENST00000526677 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
MS4A6A-205ENST00000526677 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
MS4A6A-205ENST00000526677 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
MS4A6A-205ENST00000526677 NAIPQ13075 1403 aa13.47□□□□□ -0.25
MS4A6A-205ENST00000526677 FHOD3Q2V2M9 1422 aa13.47□□□□□ -0.25
MS4A6A-205ENST00000526677 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
MS4A6A-205ENST00000526677 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
MS4A6A-205ENST00000526677 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
MS4A6A-205ENST00000526677 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
MS4A6A-205ENST00000526677 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
MS4A6A-205ENST00000526677 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
MS4A6A-205ENST00000526677 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
MS4A6A-205ENST00000526677 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
MS4A6A-205ENST00000526677 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
MS4A6A-205ENST00000526677 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
MS4A6A-205ENST00000526677 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
MS4A6A-205ENST00000526677 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
MS4A6A-205ENST00000526677 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
MS4A6A-205ENST00000526677 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
MS4A6A-205ENST00000526677 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
MS4A6A-205ENST00000526677 CUL7Q14999 1698 aa13.38□□□□□ -0.27
MS4A6A-205ENST00000526677 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
MS4A6A-205ENST00000526677 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
MS4A6A-205ENST00000526677 WDR62O43379 1518 aa13.36□□□□□ -0.27
MS4A6A-205ENST00000526677 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
MS4A6A-205ENST00000526677 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
MS4A6A-205ENST00000526677 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
MS4A6A-205ENST00000526677 POLR1AO95602 1720 aaPredicted RBP13.35□□□□□ -0.27
MS4A6A-205ENST00000526677 SAMD9Q5K651 1589 aa13.34□□□□□ -0.27
MS4A6A-205ENST00000526677 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
MS4A6A-205ENST00000526677 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
MS4A6A-205ENST00000526677 GRIN2BQ13224 1484 aa13.33□□□□□ -0.27
MS4A6A-205ENST00000526677 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.27
MS4A6A-205ENST00000526677 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
MS4A6A-205ENST00000526677 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
MS4A6A-205ENST00000526677 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
MS4A6A-205ENST00000526677 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms