RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 SETD5Q9C0A6 1442 aa19.46■□□□□ 0.71
PCDHB18P-202ENST00000526308 CUX1P39880 1505 aa19.45■□□□□ 0.7
PCDHB18P-202ENST00000526308 ANP32CO43423 234 aa19.44■□□□□ 0.7
PCDHB18P-202ENST00000526308 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
PCDHB18P-202ENST00000526308 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
PCDHB18P-202ENST00000526308 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
PCDHB18P-202ENST00000526308 PPP1R15AO75807 674 aaPredicted RBP19.35■□□□□ 0.69
PCDHB18P-202ENST00000526308 RBM19Q9Y4C8 960 aaKnown RBP19.34■□□□□ 0.69
PCDHB18P-202ENST00000526308 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
PCDHB18P-202ENST00000526308 IGF1RP08069 1367 aa19.31■□□□□ 0.68
PCDHB18P-202ENST00000526308 LRRC9Q6ZRR7 1453 aa19.31■□□□□ 0.68
PCDHB18P-202ENST00000526308 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
PCDHB18P-202ENST00000526308 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
PCDHB18P-202ENST00000526308 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
PCDHB18P-202ENST00000526308 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
PCDHB18P-202ENST00000526308 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
PCDHB18P-202ENST00000526308 CFTRP13569 1480 aa19.23■□□□□ 0.67
PCDHB18P-202ENST00000526308 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
PCDHB18P-202ENST00000526308 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
PCDHB18P-202ENST00000526308 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
PCDHB18P-202ENST00000526308 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCDHB18P-202ENST00000526308 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
PCDHB18P-202ENST00000526308 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
PCDHB18P-202ENST00000526308 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
PCDHB18P-202ENST00000526308 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
PCDHB18P-202ENST00000526308 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
PCDHB18P-202ENST00000526308 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.66
PCDHB18P-202ENST00000526308 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
PCDHB18P-202ENST00000526308 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
PCDHB18P-202ENST00000526308 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
PCDHB18P-202ENST00000526308 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
PCDHB18P-202ENST00000526308 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
PCDHB18P-202ENST00000526308 MSH5O43196 834 aa19.03■□□□□ 0.64
PCDHB18P-202ENST00000526308 FGD6Q6ZV73 1430 aa19.03■□□□□ 0.64
PCDHB18P-202ENST00000526308 CHIC2Q9UKJ5 165 aa19.01■□□□□ 0.63
PCDHB18P-202ENST00000526308 CFAP43Q8NDM7 1665 aa19.01■□□□□ 0.63
PCDHB18P-202ENST00000526308 RRP7BPQ9NSQ0 103 aa19■□□□□ 0.63
PCDHB18P-202ENST00000526308 FYCO1Q9BQS8 1478 aa19■□□□□ 0.63
PCDHB18P-202ENST00000526308 CASKIN1Q8WXD9 1431 aa18.99■□□□□ 0.63
PCDHB18P-202ENST00000526308 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
PCDHB18P-202ENST00000526308 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
PCDHB18P-202ENST00000526308 UACAQ9BZF9 1416 aa18.99■□□□□ 0.63
PCDHB18P-202ENST00000526308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCDHB18P-202ENST00000526308 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
PCDHB18P-202ENST00000526308 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
PCDHB18P-202ENST00000526308 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
PCDHB18P-202ENST00000526308 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
PCDHB18P-202ENST00000526308 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
PCDHB18P-202ENST00000526308 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
PCDHB18P-202ENST00000526308 FMN1Q68DA7 1419 aa18.94■□□□□ 0.62
PCDHB18P-202ENST00000526308 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
PCDHB18P-202ENST00000526308 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
PCDHB18P-202ENST00000526308 MRS2Q9HD23 443 aa18.91■□□□□ 0.62
PCDHB18P-202ENST00000526308 B4GALNT3Q6L9W6 998 aa18.9■□□□□ 0.62
PCDHB18P-202ENST00000526308 CCDC184Q52MB2 194 aa18.9■□□□□ 0.62
PCDHB18P-202ENST00000526308 NAIPQ13075 1403 aa18.89■□□□□ 0.61
PCDHB18P-202ENST00000526308 EFCAB5A4FU69 1503 aa18.89■□□□□ 0.61
PCDHB18P-202ENST00000526308 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
PCDHB18P-202ENST00000526308 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
PCDHB18P-202ENST00000526308 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
PCDHB18P-202ENST00000526308 FOXD1Q16676 465 aa18.86■□□□□ 0.61
PCDHB18P-202ENST00000526308 ARID3CA6NKF2 412 aa18.86■□□□□ 0.61
PCDHB18P-202ENST00000526308 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
PCDHB18P-202ENST00000526308 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
PCDHB18P-202ENST00000526308 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
PCDHB18P-202ENST00000526308 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
PCDHB18P-202ENST00000526308 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.6
PCDHB18P-202ENST00000526308 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
PCDHB18P-202ENST00000526308 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
PCDHB18P-202ENST00000526308 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
PCDHB18P-202ENST00000526308 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
PCDHB18P-202ENST00000526308 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
PCDHB18P-202ENST00000526308 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
PCDHB18P-202ENST00000526308 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
PCDHB18P-202ENST00000526308 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
PCDHB18P-202ENST00000526308 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
PCDHB18P-202ENST00000526308 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
PCDHB18P-202ENST00000526308 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
PCDHB18P-202ENST00000526308 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
PCDHB18P-202ENST00000526308 CCDC7Q96M83 1385 aa18.74■□□□□ 0.59
PCDHB18P-202ENST00000526308 NBR1Q14596 966 aa18.74■□□□□ 0.59
PCDHB18P-202ENST00000526308 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
PCDHB18P-202ENST00000526308 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
PCDHB18P-202ENST00000526308 NESP48681 1621 aa18.72■□□□□ 0.59
PCDHB18P-202ENST00000526308 ZNF326Q5BKZ1 582 aaKnown RBP18.72■□□□□ 0.59
PCDHB18P-202ENST00000526308 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
PCDHB18P-202ENST00000526308 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
PCDHB18P-202ENST00000526308 CUL7Q14999 1698 aa18.7■□□□□ 0.58
PCDHB18P-202ENST00000526308 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
PCDHB18P-202ENST00000526308 DEKP35659 375 aaKnown RBP18.68■□□□□ 0.58
PCDHB18P-202ENST00000526308 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
PCDHB18P-202ENST00000526308 NBPF8Q3BBV2 869 aa18.68■□□□□ 0.58
PCDHB18P-202ENST00000526308 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
PCDHB18P-202ENST00000526308 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
PCDHB18P-202ENST00000526308 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
PCDHB18P-202ENST00000526308 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
PCDHB18P-202ENST00000526308 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
PCDHB18P-202ENST00000526308 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
PCDHB18P-202ENST00000526308 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
PCDHB18P-202ENST00000526308 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms