RNA–Protein interactions for RNA: ENST00000526067.1

ARHGEF12-205, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-205ENST00000526067 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
ARHGEF12-205ENST00000526067 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
ARHGEF12-205ENST00000526067 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
ARHGEF12-205ENST00000526067 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
ARHGEF12-205ENST00000526067 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
ARHGEF12-205ENST00000526067 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF12-205ENST00000526067 CUX1P39880 1505 aa15.39■□□□□ 0.05
ARHGEF12-205ENST00000526067 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
ARHGEF12-205ENST00000526067 NUP160Q12769 1436 aa15.29■□□□□ 0.04
ARHGEF12-205ENST00000526067 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF12-205ENST00000526067 ERCC6L2Q5T890 1561 aa15.28■□□□□ 0.04
ARHGEF12-205ENST00000526067 DSG3P32926 999 aa15.27■□□□□ 0.04
ARHGEF12-205ENST00000526067 POTEHQ6S545 545 aa15.27■□□□□ 0.04
ARHGEF12-205ENST00000526067 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
ARHGEF12-205ENST00000526067 ABCA5Q8WWZ7 1642 aa15.24■□□□□ 0.03
ARHGEF12-205ENST00000526067 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
ARHGEF12-205ENST00000526067 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
ARHGEF12-205ENST00000526067 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
ARHGEF12-205ENST00000526067 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
ARHGEF12-205ENST00000526067 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
ARHGEF12-205ENST00000526067 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
ARHGEF12-205ENST00000526067 CAPN15O75808 1086 aa15.17■□□□□ 0.02
ARHGEF12-205ENST00000526067 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
ARHGEF12-205ENST00000526067 FAM69CQ0P6D2 419 aa15.17■□□□□ 0.02
ARHGEF12-205ENST00000526067 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
ARHGEF12-205ENST00000526067 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
ARHGEF12-205ENST00000526067 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF12-205ENST00000526067 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
ARHGEF12-205ENST00000526067 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
ARHGEF12-205ENST00000526067 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
ARHGEF12-205ENST00000526067 ILDR1Q86SU0 546 aaPredicted RBP15.08■□□□□ 0
ARHGEF12-205ENST00000526067 MAPKBP1O60336 1514 aa15.06■□□□□ 0
ARHGEF12-205ENST00000526067 SLC4A2P04920 1241 aa15.06■□□□□ 0
ARHGEF12-205ENST00000526067 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
ARHGEF12-205ENST00000526067 DIP2BQ9P265 1576 aa14.99□□□□□ -0.01
ARHGEF12-205ENST00000526067 KCNA4P22459 653 aa14.98□□□□□ -0.01
ARHGEF12-205ENST00000526067 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
ARHGEF12-205ENST00000526067 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
ARHGEF12-205ENST00000526067 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
ARHGEF12-205ENST00000526067 KDM6BO15054 1643 aa14.93□□□□□ -0.02
ARHGEF12-205ENST00000526067 IGF1RP08069 1367 aa14.92□□□□□ -0.02
ARHGEF12-205ENST00000526067 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
ARHGEF12-205ENST00000526067 PTPRGP23470 1445 aa14.88□□□□□ -0.03
ARHGEF12-205ENST00000526067 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
ARHGEF12-205ENST00000526067 ABCB7O75027 752 aa14.84□□□□□ -0.03
ARHGEF12-205ENST00000526067 GLI2P10070 1586 aa14.83□□□□□ -0.04
ARHGEF12-205ENST00000526067 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.04
ARHGEF12-205ENST00000526067 COL17A1Q9UMD9 1497 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF12-205ENST00000526067 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
ARHGEF12-205ENST00000526067 TSPOAP1O95153 1857 aa14.81□□□□□ -0.04
ARHGEF12-205ENST00000526067 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
ARHGEF12-205ENST00000526067 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
ARHGEF12-205ENST00000526067 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
ARHGEF12-205ENST00000526067 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
ARHGEF12-205ENST00000526067 ADGRL1O94910 1474 aa14.8□□□□□ -0.04
ARHGEF12-205ENST00000526067 PPRC1Q5VV67 1664 aaKnown RBP14.77□□□□□ -0.05
ARHGEF12-205ENST00000526067 KIF27Q86VH2 1401 aa14.77□□□□□ -0.05
ARHGEF12-205ENST00000526067 APLP2Q06481 763 aa14.76□□□□□ -0.05
ARHGEF12-205ENST00000526067 CARMIL2Q6F5E8 1435 aa14.76□□□□□ -0.05
ARHGEF12-205ENST00000526067 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
ARHGEF12-205ENST00000526067 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
ARHGEF12-205ENST00000526067 EPRSP07814 1512 aaKnown RBP14.72□□□□□ -0.05
ARHGEF12-205ENST00000526067 KDM5BQ9UGL1 1544 aa14.72□□□□□ -0.05
ARHGEF12-205ENST00000526067 CUL7Q14999 1698 aa14.69□□□□□ -0.06
ARHGEF12-205ENST00000526067 HECW2Q9P2P5 1572 aa14.69□□□□□ -0.06
ARHGEF12-205ENST00000526067 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF12-205ENST00000526067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF12-205ENST00000526067 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
ARHGEF12-205ENST00000526067 TEX14Q8IWB6 1497 aa14.68□□□□□ -0.06
ARHGEF12-205ENST00000526067 FBXO41Q8TF61 875 aa14.67□□□□□ -0.06
ARHGEF12-205ENST00000526067 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
ARHGEF12-205ENST00000526067 MAP3K4Q9Y6R4 1608 aa14.65□□□□□ -0.06
ARHGEF12-205ENST00000526067 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF12-205ENST00000526067 IQGAP2Q13576 1575 aa14.61□□□□□ -0.07
ARHGEF12-205ENST00000526067 MAGI3Q5TCQ9 1506 aa14.6□□□□□ -0.07
ARHGEF12-205ENST00000526067 UGGT2Q9NYU1 1516 aa14.59□□□□□ -0.07
ARHGEF12-205ENST00000526067 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
ARHGEF12-205ENST00000526067 WDR7Q9Y4E6 1490 aa14.57□□□□□ -0.08
ARHGEF12-205ENST00000526067 ZCCHC11Q5TAX3 1644 aaKnown RBP14.54□□□□□ -0.08
ARHGEF12-205ENST00000526067 KCNH8Q96L42 1107 aa14.52□□□□□ -0.08
ARHGEF12-205ENST00000526067 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
ARHGEF12-205ENST00000526067 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
ARHGEF12-205ENST00000526067 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
ARHGEF12-205ENST00000526067 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
ARHGEF12-205ENST00000526067 KIAA0556O60303 1618 aa14.48□□□□□ -0.09
ARHGEF12-205ENST00000526067 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
ARHGEF12-205ENST00000526067 PTPRMP28827 1452 aa14.46□□□□□ -0.1
ARHGEF12-205ENST00000526067 ABCA8O94911 1581 aa14.44□□□□□ -0.1
ARHGEF12-205ENST00000526067 ADAMTSL3P82987 1691 aa14.42□□□□□ -0.1
ARHGEF12-205ENST00000526067 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
ARHGEF12-205ENST00000526067 POLA2Q14181 598 aa14.41□□□□□ -0.1
ARHGEF12-205ENST00000526067 RAPGEF3O95398 923 aa14.4□□□□□ -0.1
ARHGEF12-205ENST00000526067 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF12-205ENST00000526067 ATP10BO94823 1461 aa14.39□□□□□ -0.11
ARHGEF12-205ENST00000526067 KIF21BO75037 1637 aa14.38□□□□□ -0.11
ARHGEF12-205ENST00000526067 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
ARHGEF12-205ENST00000526067 LMTK3Q96Q04 1460 aa14.36□□□□□ -0.11
ARHGEF12-205ENST00000526067 NEO1Q92859 1461 aa14.35□□□□□ -0.11
ARHGEF12-205ENST00000526067 FAM9AQ8IZU1 332 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF12-205ENST00000526067 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms