RNA–Protein interactions for RNA: ENST00000525757.1

GRAMD1B-204, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 2,471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-204ENST00000525757 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
GRAMD1B-204ENST00000525757 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
GRAMD1B-204ENST00000525757 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
GRAMD1B-204ENST00000525757 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
GRAMD1B-204ENST00000525757 CEP164Q9UPV0 1460 aa10.85□□□□□ -0.67
GRAMD1B-204ENST00000525757 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
GRAMD1B-204ENST00000525757 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
GRAMD1B-204ENST00000525757 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
GRAMD1B-204ENST00000525757 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
GRAMD1B-204ENST00000525757 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
GRAMD1B-204ENST00000525757 RGL2O15211 777 aa10.82□□□□□ -0.68
GRAMD1B-204ENST00000525757 PROM2Q8N271 834 aa10.82□□□□□ -0.68
GRAMD1B-204ENST00000525757 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
GRAMD1B-204ENST00000525757 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
GRAMD1B-204ENST00000525757 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
GRAMD1B-204ENST00000525757 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
GRAMD1B-204ENST00000525757 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
GRAMD1B-204ENST00000525757 SYNJ1O43426 1573 aa10.78□□□□□ -0.68
GRAMD1B-204ENST00000525757 CUX1P39880 1505 aa10.77□□□□□ -0.69
GRAMD1B-204ENST00000525757 MRC2Q9UBG0 1479 aa10.76□□□□□ -0.69
GRAMD1B-204ENST00000525757 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
GRAMD1B-204ENST00000525757 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
GRAMD1B-204ENST00000525757 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
GRAMD1B-204ENST00000525757 WDR62O43379 1518 aa10.72□□□□□ -0.69
GRAMD1B-204ENST00000525757 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
GRAMD1B-204ENST00000525757 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
GRAMD1B-204ENST00000525757 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
GRAMD1B-204ENST00000525757 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
GRAMD1B-204ENST00000525757 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
GRAMD1B-204ENST00000525757 EEA1Q15075 1411 aa10.67□□□□□ -0.7
GRAMD1B-204ENST00000525757 CUX2O14529 1486 aa10.67□□□□□ -0.7
GRAMD1B-204ENST00000525757 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
GRAMD1B-204ENST00000525757 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
GRAMD1B-204ENST00000525757 NPM2Q86SE8 214 aaKnown RBP10.64□□□□□ -0.71
GRAMD1B-204ENST00000525757 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
GRAMD1B-204ENST00000525757 SOGA1O94964 1423 aa10.63□□□□□ -0.71
GRAMD1B-204ENST00000525757 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
GRAMD1B-204ENST00000525757 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
GRAMD1B-204ENST00000525757 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
GRAMD1B-204ENST00000525757 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
GRAMD1B-204ENST00000525757 HRCP23327 699 aa10.61□□□□□ -0.71
GRAMD1B-204ENST00000525757 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
GRAMD1B-204ENST00000525757 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
GRAMD1B-204ENST00000525757 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
GRAMD1B-204ENST00000525757 RAD54L2Q9Y4B4 1467 aa10.58□□□□□ -0.72
GRAMD1B-204ENST00000525757 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
GRAMD1B-204ENST00000525757 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
GRAMD1B-204ENST00000525757 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
GRAMD1B-204ENST00000525757 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
GRAMD1B-204ENST00000525757 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
GRAMD1B-204ENST00000525757 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.72
GRAMD1B-204ENST00000525757 CUL7Q14999 1698 aa10.52□□□□□ -0.73
GRAMD1B-204ENST00000525757 PBRM1Q86U86 1689 aa10.52□□□□□ -0.73
GRAMD1B-204ENST00000525757 MSH5O43196 834 aa10.52□□□□□ -0.73
GRAMD1B-204ENST00000525757 KIF21BO75037 1637 aa10.52□□□□□ -0.73
GRAMD1B-204ENST00000525757 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
GRAMD1B-204ENST00000525757 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
GRAMD1B-204ENST00000525757 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
GRAMD1B-204ENST00000525757 FAM9AQ8IZU1 332 aaPredicted RBP10.49□□□□□ -0.73
GRAMD1B-204ENST00000525757 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
GRAMD1B-204ENST00000525757 IGF1RP08069 1367 aa10.48□□□□□ -0.73
GRAMD1B-204ENST00000525757 ZNF608Q9ULD9 1512 aaPredicted RBP10.47□□□□□ -0.73
GRAMD1B-204ENST00000525757 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
GRAMD1B-204ENST00000525757 GOLGA3Q08378 1498 aa10.46□□□□□ -0.73
GRAMD1B-204ENST00000525757 AQRO60306 1485 aaKnown RBP eCLIP10.46□□□□□ -0.74
GRAMD1B-204ENST00000525757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
GRAMD1B-204ENST00000525757 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
GRAMD1B-204ENST00000525757 MAGI1Q96QZ7 1491 aaPredicted RBP10.44□□□□□ -0.74
GRAMD1B-204ENST00000525757 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
GRAMD1B-204ENST00000525757 RAPGEF2Q9Y4G8 1499 aa10.44□□□□□ -0.74
GRAMD1B-204ENST00000525757 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
GRAMD1B-204ENST00000525757 ADAMTS12P58397 1594 aa10.43□□□□□ -0.74
GRAMD1B-204ENST00000525757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.74
GRAMD1B-204ENST00000525757 FHAD1B1AJZ9 1412 aa10.43□□□□□ -0.74
GRAMD1B-204ENST00000525757 SNAPC4Q5SXM2 1469 aa10.4□□□□□ -0.74
GRAMD1B-204ENST00000525757 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
GRAMD1B-204ENST00000525757 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
GRAMD1B-204ENST00000525757 TNIKQ9UKE5 1360 aa10.38□□□□□ -0.75
GRAMD1B-204ENST00000525757 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
GRAMD1B-204ENST00000525757 CTTNBP2Q8WZ74 1663 aa10.37□□□□□ -0.75
GRAMD1B-204ENST00000525757 NEUROD2Q15784 382 aa10.36□□□□□ -0.75
GRAMD1B-204ENST00000525757 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
GRAMD1B-204ENST00000525757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
GRAMD1B-204ENST00000525757 LOC105371045A0A1W2PR82 267 aa10.35□□□□□ -0.75
GRAMD1B-204ENST00000525757 GTPBP6O43824 516 aaPredicted RBP10.35□□□□□ -0.75
GRAMD1B-204ENST00000525757 ARID3AQ99856 593 aa10.35□□□□□ -0.75
GRAMD1B-204ENST00000525757 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
GRAMD1B-204ENST00000525757 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
GRAMD1B-204ENST00000525757 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
GRAMD1B-204ENST00000525757 CHD1O14646 1710 aa10.32□□□□□ -0.76
GRAMD1B-204ENST00000525757 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
GRAMD1B-204ENST00000525757 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
GRAMD1B-204ENST00000525757 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
GRAMD1B-204ENST00000525757 IQGAP2Q13576 1575 aa10.28□□□□□ -0.76
GRAMD1B-204ENST00000525757 NUP160Q12769 1436 aa10.28□□□□□ -0.76
GRAMD1B-204ENST00000525757 KIAA0586Q9BVV6 1533 aa10.28□□□□□ -0.76
GRAMD1B-204ENST00000525757 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
GRAMD1B-204ENST00000525757 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
GRAMD1B-204ENST00000525757 CEP170Q5SW79 1584 aa10.27□□□□□ -0.77
GRAMD1B-204ENST00000525757 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms