RNA–Protein interactions for RNA: ENST00000525757.1

GRAMD1B-204, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 2,471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-204ENST00000525757 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
GRAMD1B-204ENST00000525757 AEBP2Q6ZN18 517 aaPredicted RBP16.02■□□□□ 0.15
GRAMD1B-204ENST00000525757 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
GRAMD1B-204ENST00000525757 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
GRAMD1B-204ENST00000525757 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
GRAMD1B-204ENST00000525757 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
GRAMD1B-204ENST00000525757 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
GRAMD1B-204ENST00000525757 KCNA4P22459 653 aa13.71□□□□□ -0.21
GRAMD1B-204ENST00000525757 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
GRAMD1B-204ENST00000525757 ADRA2BP18089 450 aa13.33□□□□□ -0.28
GRAMD1B-204ENST00000525757 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
GRAMD1B-204ENST00000525757 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
GRAMD1B-204ENST00000525757 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
GRAMD1B-204ENST00000525757 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
GRAMD1B-204ENST00000525757 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
GRAMD1B-204ENST00000525757 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
GRAMD1B-204ENST00000525757 ZBTB22O15209 634 aa12.73□□□□□ -0.37
GRAMD1B-204ENST00000525757 ABCC9O60706 1549 aa12.6□□□□□ -0.39
GRAMD1B-204ENST00000525757 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
GRAMD1B-204ENST00000525757 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
GRAMD1B-204ENST00000525757 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
GRAMD1B-204ENST00000525757 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
GRAMD1B-204ENST00000525757 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
GRAMD1B-204ENST00000525757 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
GRAMD1B-204ENST00000525757 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
GRAMD1B-204ENST00000525757 NACADO15069 1562 aa12.32□□□□□ -0.44
GRAMD1B-204ENST00000525757 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
GRAMD1B-204ENST00000525757 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
GRAMD1B-204ENST00000525757 FOXD1Q16676 465 aa12.22□□□□□ -0.45
GRAMD1B-204ENST00000525757 FKBP8Q14318 412 aa12.12□□□□□ -0.47
GRAMD1B-204ENST00000525757 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
GRAMD1B-204ENST00000525757 SCRIBQ14160 1630 aa12□□□□□ -0.49
GRAMD1B-204ENST00000525757 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
GRAMD1B-204ENST00000525757 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
GRAMD1B-204ENST00000525757 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.49
GRAMD1B-204ENST00000525757 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
GRAMD1B-204ENST00000525757 BCANQ96GW7 911 aa11.89□□□□□ -0.51
GRAMD1B-204ENST00000525757 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1B-204ENST00000525757 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1B-204ENST00000525757 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
GRAMD1B-204ENST00000525757 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
GRAMD1B-204ENST00000525757 BICRAQ9NZM4 1560 aa11.81□□□□□ -0.52
GRAMD1B-204ENST00000525757 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
GRAMD1B-204ENST00000525757 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
GRAMD1B-204ENST00000525757 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
GRAMD1B-204ENST00000525757 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
GRAMD1B-204ENST00000525757 BAZ1AQ9NRL2 1556 aaPredicted RBP11.59□□□□□ -0.55
GRAMD1B-204ENST00000525757 CECR2Q9BXF3 1484 aa11.55□□□□□ -0.56
GRAMD1B-204ENST00000525757 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
GRAMD1B-204ENST00000525757 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
GRAMD1B-204ENST00000525757 ARXQ96QS3 562 aa11.54□□□□□ -0.56
GRAMD1B-204ENST00000525757 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
GRAMD1B-204ENST00000525757 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
GRAMD1B-204ENST00000525757 FBLN2P98095 1184 aa11.5□□□□□ -0.57
GRAMD1B-204ENST00000525757 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
GRAMD1B-204ENST00000525757 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
GRAMD1B-204ENST00000525757 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
GRAMD1B-204ENST00000525757 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
GRAMD1B-204ENST00000525757 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
GRAMD1B-204ENST00000525757 SMARCA2P51531 1590 aa11.42□□□□□ -0.58
GRAMD1B-204ENST00000525757 WIZO95785 1651 aa11.4□□□□□ -0.58
GRAMD1B-204ENST00000525757 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
GRAMD1B-204ENST00000525757 GTF3C3Q9Y5Q9 886 aa11.38□□□□□ -0.59
GRAMD1B-204ENST00000525757 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
GRAMD1B-204ENST00000525757 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
GRAMD1B-204ENST00000525757 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
GRAMD1B-204ENST00000525757 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
GRAMD1B-204ENST00000525757 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
GRAMD1B-204ENST00000525757 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
GRAMD1B-204ENST00000525757 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
GRAMD1B-204ENST00000525757 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
GRAMD1B-204ENST00000525757 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
GRAMD1B-204ENST00000525757 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
GRAMD1B-204ENST00000525757 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
GRAMD1B-204ENST00000525757 HOMEZQ8IX15 550 aa11.24□□□□□ -0.61
GRAMD1B-204ENST00000525757 PKD2Q13563 968 aa11.23□□□□□ -0.61
GRAMD1B-204ENST00000525757 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
GRAMD1B-204ENST00000525757 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
GRAMD1B-204ENST00000525757 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
GRAMD1B-204ENST00000525757 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
GRAMD1B-204ENST00000525757 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
GRAMD1B-204ENST00000525757 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
GRAMD1B-204ENST00000525757 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.62
GRAMD1B-204ENST00000525757 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
GRAMD1B-204ENST00000525757 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
GRAMD1B-204ENST00000525757 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
GRAMD1B-204ENST00000525757 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
GRAMD1B-204ENST00000525757 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
GRAMD1B-204ENST00000525757 PRDM2Q13029 1718 aa11.05□□□□□ -0.64
GRAMD1B-204ENST00000525757 C14orf37Q86TY3 774 aa11.03□□□□□ -0.64
GRAMD1B-204ENST00000525757 CFTRP13569 1480 aa11.02□□□□□ -0.65
GRAMD1B-204ENST00000525757 LAMC3Q9Y6N6 1575 aa11.01□□□□□ -0.65
GRAMD1B-204ENST00000525757 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
GRAMD1B-204ENST00000525757 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
GRAMD1B-204ENST00000525757 NBR1Q14596 966 aa10.97□□□□□ -0.65
GRAMD1B-204ENST00000525757 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.65
GRAMD1B-204ENST00000525757 NESP48681 1621 aa10.92□□□□□ -0.66
GRAMD1B-204ENST00000525757 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
GRAMD1B-204ENST00000525757 PDS5BQ9NTI5 1447 aa10.91□□□□□ -0.66
GRAMD1B-204ENST00000525757 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms