RNA–Protein interactions for RNA: ENST00000525411.1

PATE4-202, Transcript of prostate and testis expressed 4, humanhuman

TSL 1 (best)

Gene PATE4, Length 1,001 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATE4-202ENST00000525411 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
PATE4-202ENST00000525411 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
PATE4-202ENST00000525411 NESP48681 1621 aa13.36□□□□□ -0.27
PATE4-202ENST00000525411 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
PATE4-202ENST00000525411 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
PATE4-202ENST00000525411 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
PATE4-202ENST00000525411 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
PATE4-202ENST00000525411 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
PATE4-202ENST00000525411 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
PATE4-202ENST00000525411 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
PATE4-202ENST00000525411 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
PATE4-202ENST00000525411 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
PATE4-202ENST00000525411 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
PATE4-202ENST00000525411 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
PATE4-202ENST00000525411 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
PATE4-202ENST00000525411 WDR62O43379 1518 aa13.13□□□□□ -0.31
PATE4-202ENST00000525411 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
PATE4-202ENST00000525411 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
PATE4-202ENST00000525411 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
PATE4-202ENST00000525411 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
PATE4-202ENST00000525411 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
PATE4-202ENST00000525411 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
PATE4-202ENST00000525411 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
PATE4-202ENST00000525411 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
PATE4-202ENST00000525411 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
PATE4-202ENST00000525411 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
PATE4-202ENST00000525411 WIZO95785 1651 aa12.93□□□□□ -0.34
PATE4-202ENST00000525411 CFTRP13569 1480 aa12.92□□□□□ -0.34
PATE4-202ENST00000525411 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
PATE4-202ENST00000525411 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
PATE4-202ENST00000525411 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
PATE4-202ENST00000525411 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
PATE4-202ENST00000525411 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
PATE4-202ENST00000525411 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
PATE4-202ENST00000525411 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
PATE4-202ENST00000525411 PRDM2Q13029 1718 aa12.81□□□□□ -0.36
PATE4-202ENST00000525411 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
PATE4-202ENST00000525411 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
PATE4-202ENST00000525411 POTEMA6NI47 508 aa12.8□□□□□ -0.36
PATE4-202ENST00000525411 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
PATE4-202ENST00000525411 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
PATE4-202ENST00000525411 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
PATE4-202ENST00000525411 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
PATE4-202ENST00000525411 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
PATE4-202ENST00000525411 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
PATE4-202ENST00000525411 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
PATE4-202ENST00000525411 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
PATE4-202ENST00000525411 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
PATE4-202ENST00000525411 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
PATE4-202ENST00000525411 C7P10643 843 aa12.71□□□□□ -0.37
PATE4-202ENST00000525411 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
PATE4-202ENST00000525411 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
PATE4-202ENST00000525411 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
PATE4-202ENST00000525411 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
PATE4-202ENST00000525411 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
PATE4-202ENST00000525411 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
PATE4-202ENST00000525411 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
PATE4-202ENST00000525411 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
PATE4-202ENST00000525411 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
PATE4-202ENST00000525411 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
PATE4-202ENST00000525411 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
PATE4-202ENST00000525411 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
PATE4-202ENST00000525411 CHD1O14646 1710 aa12.64□□□□□ -0.39
PATE4-202ENST00000525411 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
PATE4-202ENST00000525411 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
PATE4-202ENST00000525411 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
PATE4-202ENST00000525411 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
PATE4-202ENST00000525411 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
PATE4-202ENST00000525411 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
PATE4-202ENST00000525411 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
PATE4-202ENST00000525411 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.4
PATE4-202ENST00000525411 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
PATE4-202ENST00000525411 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
PATE4-202ENST00000525411 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
PATE4-202ENST00000525411 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
PATE4-202ENST00000525411 MAGI1Q96QZ7 1491 aaPredicted RBP12.48□□□□□ -0.41
PATE4-202ENST00000525411 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
PATE4-202ENST00000525411 SOGA1O94964 1423 aa12.45□□□□□ -0.42
PATE4-202ENST00000525411 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
PATE4-202ENST00000525411 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
PATE4-202ENST00000525411 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
PATE4-202ENST00000525411 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
PATE4-202ENST00000525411 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
PATE4-202ENST00000525411 TIE1P35590 1138 aa12.43□□□□□ -0.42
PATE4-202ENST00000525411 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
PATE4-202ENST00000525411 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
PATE4-202ENST00000525411 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
PATE4-202ENST00000525411 PROM2Q8N271 834 aa12.42□□□□□ -0.42
PATE4-202ENST00000525411 BMP2KQ9NSY1 1161 aaPredicted RBP12.42□□□□□ -0.42
PATE4-202ENST00000525411 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
PATE4-202ENST00000525411 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
PATE4-202ENST00000525411 GAPVD1Q14C86 1478 aa12.38□□□□□ -0.43
PATE4-202ENST00000525411 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
PATE4-202ENST00000525411 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
PATE4-202ENST00000525411 CUX1P39880 1505 aa12.34□□□□□ -0.43
PATE4-202ENST00000525411 MAP3K13O43283 966 aa12.34□□□□□ -0.43
PATE4-202ENST00000525411 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
PATE4-202ENST00000525411 SEC24BO95487 1268 aa12.33□□□□□ -0.44
PATE4-202ENST00000525411 IER5LQ5T953 404 aa12.31□□□□□ -0.44
PATE4-202ENST00000525411 ABCA5Q8WWZ7 1642 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms