RNA–Protein interactions for RNA: ENST00000525411.1

PATE4-202, Transcript of prostate and testis expressed 4, humanhuman

TSL 1 (best)

Gene PATE4, Length 1,001 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATE4-202ENST00000525411 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
PATE4-202ENST00000525411 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
PATE4-202ENST00000525411 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
PATE4-202ENST00000525411 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
PATE4-202ENST00000525411 FOXD1Q16676 465 aa20.9■□□□□ 0.94
PATE4-202ENST00000525411 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
PATE4-202ENST00000525411 MSH5O43196 834 aa19.89■□□□□ 0.77
PATE4-202ENST00000525411 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
PATE4-202ENST00000525411 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
PATE4-202ENST00000525411 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
PATE4-202ENST00000525411 ADRA2BP18089 450 aa19.05■□□□□ 0.64
PATE4-202ENST00000525411 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
PATE4-202ENST00000525411 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
PATE4-202ENST00000525411 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
PATE4-202ENST00000525411 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
PATE4-202ENST00000525411 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
PATE4-202ENST00000525411 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
PATE4-202ENST00000525411 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
PATE4-202ENST00000525411 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
PATE4-202ENST00000525411 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
PATE4-202ENST00000525411 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
PATE4-202ENST00000525411 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
PATE4-202ENST00000525411 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
PATE4-202ENST00000525411 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
PATE4-202ENST00000525411 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
PATE4-202ENST00000525411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
PATE4-202ENST00000525411 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
PATE4-202ENST00000525411 POTEHQ6S545 545 aa15.68■□□□□ 0.1
PATE4-202ENST00000525411 ABCC9O60706 1549 aa15.67■□□□□ 0.1
PATE4-202ENST00000525411 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
PATE4-202ENST00000525411 CAPN15O75808 1086 aa15.6■□□□□ 0.09
PATE4-202ENST00000525411 DSG3P32926 999 aa15.6■□□□□ 0.09
PATE4-202ENST00000525411 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
PATE4-202ENST00000525411 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
PATE4-202ENST00000525411 APLP2Q06481 763 aa15.39■□□□□ 0.05
PATE4-202ENST00000525411 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
PATE4-202ENST00000525411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
PATE4-202ENST00000525411 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
PATE4-202ENST00000525411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
PATE4-202ENST00000525411 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
PATE4-202ENST00000525411 ABCB7O75027 752 aa15.14■□□□□ 0.01
PATE4-202ENST00000525411 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
PATE4-202ENST00000525411 KCNA4P22459 653 aa15.05■□□□□ -0
PATE4-202ENST00000525411 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
PATE4-202ENST00000525411 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
PATE4-202ENST00000525411 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
PATE4-202ENST00000525411 NACADO15069 1562 aa14.73□□□□□ -0.05
PATE4-202ENST00000525411 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
PATE4-202ENST00000525411 POLA2Q14181 598 aa14.69□□□□□ -0.06
PATE4-202ENST00000525411 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
PATE4-202ENST00000525411 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
PATE4-202ENST00000525411 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
PATE4-202ENST00000525411 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
PATE4-202ENST00000525411 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
PATE4-202ENST00000525411 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
PATE4-202ENST00000525411 BICRAQ9NZM4 1560 aa14.42□□□□□ -0.1
PATE4-202ENST00000525411 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
PATE4-202ENST00000525411 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
PATE4-202ENST00000525411 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
PATE4-202ENST00000525411 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
PATE4-202ENST00000525411 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
PATE4-202ENST00000525411 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
PATE4-202ENST00000525411 ATF5Q9Y2D1 282 aaPredicted RBP14.24□□□□□ -0.13
PATE4-202ENST00000525411 HAX1O00165 279 aa14.19□□□□□ -0.14
PATE4-202ENST00000525411 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
PATE4-202ENST00000525411 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
PATE4-202ENST00000525411 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
PATE4-202ENST00000525411 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
PATE4-202ENST00000525411 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
PATE4-202ENST00000525411 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
PATE4-202ENST00000525411 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
PATE4-202ENST00000525411 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
PATE4-202ENST00000525411 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
PATE4-202ENST00000525411 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
PATE4-202ENST00000525411 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
PATE4-202ENST00000525411 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
PATE4-202ENST00000525411 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
PATE4-202ENST00000525411 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
PATE4-202ENST00000525411 FBLN2P98095 1184 aa13.92□□□□□ -0.18
PATE4-202ENST00000525411 EVX2Q03828 476 aa13.85□□□□□ -0.19
PATE4-202ENST00000525411 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
PATE4-202ENST00000525411 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
PATE4-202ENST00000525411 ZBTB22O15209 634 aa13.78□□□□□ -0.2
PATE4-202ENST00000525411 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
PATE4-202ENST00000525411 CUX2O14529 1486 aa13.74□□□□□ -0.21
PATE4-202ENST00000525411 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
PATE4-202ENST00000525411 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
PATE4-202ENST00000525411 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
PATE4-202ENST00000525411 GABBR2O75899 941 aa13.62□□□□□ -0.23
PATE4-202ENST00000525411 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PATE4-202ENST00000525411 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
PATE4-202ENST00000525411 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
PATE4-202ENST00000525411 LHX8Q68G74 356 aa13.57□□□□□ -0.24
PATE4-202ENST00000525411 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
PATE4-202ENST00000525411 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
PATE4-202ENST00000525411 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
PATE4-202ENST00000525411 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
PATE4-202ENST00000525411 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
PATE4-202ENST00000525411 CLCN6P51797 869 aa13.43□□□□□ -0.26
PATE4-202ENST00000525411 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms