RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
PCDHB18P-201ENST00000524813 PRXQ9BXM0 1461 aa26.34■■□□□ 1.81
PCDHB18P-201ENST00000524813 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
PCDHB18P-201ENST00000524813 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.81
PCDHB18P-201ENST00000524813 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
PCDHB18P-201ENST00000524813 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
PCDHB18P-201ENST00000524813 TSHZ2Q9NRE2 1034 aa26.25■■□□□ 1.79
PCDHB18P-201ENST00000524813 IGF1RP08069 1367 aa26.23■■□□□ 1.79
PCDHB18P-201ENST00000524813 WDR62O43379 1518 aa26.21■■□□□ 1.79
PCDHB18P-201ENST00000524813 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
PCDHB18P-201ENST00000524813 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
PCDHB18P-201ENST00000524813 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
PCDHB18P-201ENST00000524813 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
PCDHB18P-201ENST00000524813 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
PCDHB18P-201ENST00000524813 ITGAEP38570 1179 aa26.15■■□□□ 1.78
PCDHB18P-201ENST00000524813 KCNH8Q96L42 1107 aa26.14■■□□□ 1.78
PCDHB18P-201ENST00000524813 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
PCDHB18P-201ENST00000524813 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
PCDHB18P-201ENST00000524813 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
PCDHB18P-201ENST00000524813 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
PCDHB18P-201ENST00000524813 CUL7Q14999 1698 aa26.06■■□□□ 1.76
PCDHB18P-201ENST00000524813 MAPKBP1O60336 1514 aa26.05■■□□□ 1.76
PCDHB18P-201ENST00000524813 ANP32EQ9BTT0 268 aa26.05■■□□□ 1.76
PCDHB18P-201ENST00000524813 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
PCDHB18P-201ENST00000524813 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
PCDHB18P-201ENST00000524813 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
PCDHB18P-201ENST00000524813 ZNF608Q9ULD9 1512 aaPredicted RBP25.99■■□□□ 1.75
PCDHB18P-201ENST00000524813 BCANQ96GW7 911 aa25.97■■□□□ 1.75
PCDHB18P-201ENST00000524813 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
PCDHB18P-201ENST00000524813 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
PCDHB18P-201ENST00000524813 FKBP8Q14318 412 aa25.92■■□□□ 1.74
PCDHB18P-201ENST00000524813 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
PCDHB18P-201ENST00000524813 TIAM1Q13009 1591 aa25.9■■□□□ 1.74
PCDHB18P-201ENST00000524813 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
PCDHB18P-201ENST00000524813 MAP3K1Q13233 1512 aa25.86■■□□□ 1.73
PCDHB18P-201ENST00000524813 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
PCDHB18P-201ENST00000524813 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
PCDHB18P-201ENST00000524813 PPP1R15AO75807 674 aaPredicted RBP25.83■■□□□ 1.73
PCDHB18P-201ENST00000524813 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
PCDHB18P-201ENST00000524813 LRRC9Q6ZRR7 1453 aa25.81■■□□□ 1.72
PCDHB18P-201ENST00000524813 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
PCDHB18P-201ENST00000524813 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
PCDHB18P-201ENST00000524813 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
PCDHB18P-201ENST00000524813 NEFLP07196 543 aa25.76■■□□□ 1.71
PCDHB18P-201ENST00000524813 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
PCDHB18P-201ENST00000524813 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
PCDHB18P-201ENST00000524813 CCER2I3L3R5 266 aa25.73■■□□□ 1.71
PCDHB18P-201ENST00000524813 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
PCDHB18P-201ENST00000524813 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
PCDHB18P-201ENST00000524813 ANP32CO43423 234 aa25.69■■□□□ 1.7
PCDHB18P-201ENST00000524813 RBM19Q9Y4C8 960 aaKnown RBP25.69■■□□□ 1.7
PCDHB18P-201ENST00000524813 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
PCDHB18P-201ENST00000524813 CFAP43Q8NDM7 1665 aa25.63■■□□□ 1.69
PCDHB18P-201ENST00000524813 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
PCDHB18P-201ENST00000524813 PCF11O94913 1555 aaKnown RBP25.6■■□□□ 1.69
PCDHB18P-201ENST00000524813 FHOD3Q2V2M9 1422 aa25.59■■□□□ 1.69
PCDHB18P-201ENST00000524813 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
PCDHB18P-201ENST00000524813 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
PCDHB18P-201ENST00000524813 GRIN2AQ12879 1464 aa25.57■■□□□ 1.68
PCDHB18P-201ENST00000524813 BCL11AQ9H165 835 aa25.56■■□□□ 1.68
PCDHB18P-201ENST00000524813 IQGAP2Q13576 1575 aa25.55■■□□□ 1.68
PCDHB18P-201ENST00000524813 FBLN2P98095 1184 aa25.54■■□□□ 1.68
PCDHB18P-201ENST00000524813 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
PCDHB18P-201ENST00000524813 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
PCDHB18P-201ENST00000524813 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
PCDHB18P-201ENST00000524813 TONSLQ96HA7 1378 aa25.5■■□□□ 1.67
PCDHB18P-201ENST00000524813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.5■■□□□ 1.67
PCDHB18P-201ENST00000524813 CEP170Q5SW79 1584 aa25.45■■□□□ 1.67
PCDHB18P-201ENST00000524813 FYCO1Q9BQS8 1478 aa25.45■■□□□ 1.66
PCDHB18P-201ENST00000524813 CASKIN1Q8WXD9 1431 aa25.41■■□□□ 1.66
PCDHB18P-201ENST00000524813 KIAA0586Q9BVV6 1533 aa25.41■■□□□ 1.66
PCDHB18P-201ENST00000524813 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
PCDHB18P-201ENST00000524813 MSH5O43196 834 aa25.39■■□□□ 1.66
PCDHB18P-201ENST00000524813 FGD6Q6ZV73 1430 aa25.39■■□□□ 1.65
PCDHB18P-201ENST00000524813 CHD1O14646 1710 aa25.38■■□□□ 1.65
PCDHB18P-201ENST00000524813 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
PCDHB18P-201ENST00000524813 UACAQ9BZF9 1416 aa25.36■■□□□ 1.65
PCDHB18P-201ENST00000524813 HNRNPUQ00839 825 aaKnown RBP eCLIP25.36■■□□□ 1.65
PCDHB18P-201ENST00000524813 UGGT2Q9NYU1 1516 aa25.35■■□□□ 1.65
PCDHB18P-201ENST00000524813 HFM1A2PYH4 1435 aa25.33■■□□□ 1.65
PCDHB18P-201ENST00000524813 NUP160Q12769 1436 aa25.33■■□□□ 1.65
PCDHB18P-201ENST00000524813 PTPRKQ15262 1439 aa25.32■■□□□ 1.64
PCDHB18P-201ENST00000524813 IRX6P78412 446 aaPredicted RBP25.31■■□□□ 1.64
PCDHB18P-201ENST00000524813 PTPN23Q9H3S7 1636 aa25.31■■□□□ 1.64
PCDHB18P-201ENST00000524813 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
PCDHB18P-201ENST00000524813 CDK11AQ9UQ88 783 aaPredicted RBP25.29■■□□□ 1.64
PCDHB18P-201ENST00000524813 FANCIQ9NVI1 1328 aa25.28■■□□□ 1.64
PCDHB18P-201ENST00000524813 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
PCDHB18P-201ENST00000524813 LRRIQ1Q96JM4 1722 aa25.27■■□□□ 1.64
PCDHB18P-201ENST00000524813 KDM5BQ9UGL1 1544 aa25.26■■□□□ 1.63
PCDHB18P-201ENST00000524813 MTUS2Q5JR59 1369 aa25.25■■□□□ 1.63
PCDHB18P-201ENST00000524813 NAIPQ13075 1403 aa25.24■■□□□ 1.63
PCDHB18P-201ENST00000524813 WASHC2AQ641Q2 1341 aa25.2■■□□□ 1.63
PCDHB18P-201ENST00000524813 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
PCDHB18P-201ENST00000524813 JPH4Q96JJ6 628 aa25.16■■□□□ 1.62
PCDHB18P-201ENST00000524813 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
PCDHB18P-201ENST00000524813 HECW1Q76N89 1606 aa25.15■■□□□ 1.62
PCDHB18P-201ENST00000524813 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
PCDHB18P-201ENST00000524813 ERICH6BQ5W0A0 696 aa25.15■■□□□ 1.62
PCDHB18P-201ENST00000524813 ERICH6Q7L0X2 663 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms