RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 OSCARQ8IYS5 282 aa14.2□□□□□ -0.14
POLB-215ENST00000524208 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
POLB-215ENST00000524208 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
POLB-215ENST00000524208 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
POLB-215ENST00000524208 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
POLB-215ENST00000524208 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
POLB-215ENST00000524208 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
POLB-215ENST00000524208 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
POLB-215ENST00000524208 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
POLB-215ENST00000524208 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
POLB-215ENST00000524208 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
POLB-215ENST00000524208 HAX1O00165 279 aa13.99□□□□□ -0.17
POLB-215ENST00000524208 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
POLB-215ENST00000524208 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
POLB-215ENST00000524208 TARBP1Q13395 1621 aaKnown RBP13.98□□□□□ -0.17
POLB-215ENST00000524208 CUX1P39880 1505 aa13.98□□□□□ -0.17
POLB-215ENST00000524208 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
POLB-215ENST00000524208 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
POLB-215ENST00000524208 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
POLB-215ENST00000524208 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
POLB-215ENST00000524208 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
POLB-215ENST00000524208 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
POLB-215ENST00000524208 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
POLB-215ENST00000524208 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.19
POLB-215ENST00000524208 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
POLB-215ENST00000524208 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
POLB-215ENST00000524208 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
POLB-215ENST00000524208 PROM2Q8N271 834 aa13.85□□□□□ -0.19
POLB-215ENST00000524208 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
POLB-215ENST00000524208 SOGA1O94964 1423 aa13.81□□□□□ -0.2
POLB-215ENST00000524208 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
POLB-215ENST00000524208 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
POLB-215ENST00000524208 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
POLB-215ENST00000524208 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
POLB-215ENST00000524208 CHD1O14646 1710 aa13.77□□□□□ -0.21
POLB-215ENST00000524208 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
POLB-215ENST00000524208 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
POLB-215ENST00000524208 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
POLB-215ENST00000524208 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
POLB-215ENST00000524208 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
POLB-215ENST00000524208 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
POLB-215ENST00000524208 EVX2Q03828 476 aa13.72□□□□□ -0.21
POLB-215ENST00000524208 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
POLB-215ENST00000524208 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
POLB-215ENST00000524208 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
POLB-215ENST00000524208 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
POLB-215ENST00000524208 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
POLB-215ENST00000524208 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
POLB-215ENST00000524208 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
POLB-215ENST00000524208 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
POLB-215ENST00000524208 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
POLB-215ENST00000524208 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
POLB-215ENST00000524208 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
POLB-215ENST00000524208 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
POLB-215ENST00000524208 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
POLB-215ENST00000524208 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
POLB-215ENST00000524208 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
POLB-215ENST00000524208 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
POLB-215ENST00000524208 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
POLB-215ENST00000524208 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
POLB-215ENST00000524208 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
POLB-215ENST00000524208 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
POLB-215ENST00000524208 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
POLB-215ENST00000524208 NUP160Q12769 1436 aa13.54□□□□□ -0.24
POLB-215ENST00000524208 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
POLB-215ENST00000524208 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
POLB-215ENST00000524208 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
POLB-215ENST00000524208 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
POLB-215ENST00000524208 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
POLB-215ENST00000524208 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
POLB-215ENST00000524208 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
POLB-215ENST00000524208 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
POLB-215ENST00000524208 SHROOM2Q13796 1616 aa13.46□□□□□ -0.25
POLB-215ENST00000524208 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
POLB-215ENST00000524208 KIF27Q86VH2 1401 aa13.43□□□□□ -0.26
POLB-215ENST00000524208 IGF1RP08069 1367 aa13.43□□□□□ -0.26
POLB-215ENST00000524208 GABBR2O75899 941 aa13.42□□□□□ -0.26
POLB-215ENST00000524208 CUL7Q14999 1698 aa13.41□□□□□ -0.26
POLB-215ENST00000524208 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
POLB-215ENST00000524208 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
POLB-215ENST00000524208 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
POLB-215ENST00000524208 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
POLB-215ENST00000524208 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
POLB-215ENST00000524208 KIAA0586Q9BVV6 1533 aa13.3□□□□□ -0.28
POLB-215ENST00000524208 MIER1Q8N108 512 aa13.29□□□□□ -0.28
POLB-215ENST00000524208 LHX8Q68G74 356 aa13.28□□□□□ -0.28
POLB-215ENST00000524208 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
POLB-215ENST00000524208 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
POLB-215ENST00000524208 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
POLB-215ENST00000524208 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
POLB-215ENST00000524208 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
POLB-215ENST00000524208 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
POLB-215ENST00000524208 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
POLB-215ENST00000524208 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
POLB-215ENST00000524208 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
POLB-215ENST00000524208 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
POLB-215ENST00000524208 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
POLB-215ENST00000524208 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
POLB-215ENST00000524208 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
POLB-215ENST00000524208 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms