RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
POLB-215ENST00000524208 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
POLB-215ENST00000524208 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
POLB-215ENST00000524208 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
POLB-215ENST00000524208 FOXD1Q16676 465 aa20.64■□□□□ 0.89
POLB-215ENST00000524208 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
POLB-215ENST00000524208 MSH5O43196 834 aa19.47■□□□□ 0.71
POLB-215ENST00000524208 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
POLB-215ENST00000524208 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
POLB-215ENST00000524208 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
POLB-215ENST00000524208 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
POLB-215ENST00000524208 ADRA2BP18089 450 aa19■□□□□ 0.63
POLB-215ENST00000524208 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
POLB-215ENST00000524208 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
POLB-215ENST00000524208 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
POLB-215ENST00000524208 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
POLB-215ENST00000524208 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
POLB-215ENST00000524208 KCNA4P22459 653 aa17.05■□□□□ 0.32
POLB-215ENST00000524208 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
POLB-215ENST00000524208 ABCC9O60706 1549 aa16.93■□□□□ 0.3
POLB-215ENST00000524208 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
POLB-215ENST00000524208 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
POLB-215ENST00000524208 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
POLB-215ENST00000524208 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
POLB-215ENST00000524208 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
POLB-215ENST00000524208 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
POLB-215ENST00000524208 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
POLB-215ENST00000524208 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
POLB-215ENST00000524208 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
POLB-215ENST00000524208 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
POLB-215ENST00000524208 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
POLB-215ENST00000524208 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
POLB-215ENST00000524208 NACADO15069 1562 aa16.14■□□□□ 0.17
POLB-215ENST00000524208 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
POLB-215ENST00000524208 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
POLB-215ENST00000524208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
POLB-215ENST00000524208 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
POLB-215ENST00000524208 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
POLB-215ENST00000524208 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
POLB-215ENST00000524208 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
POLB-215ENST00000524208 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
POLB-215ENST00000524208 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
POLB-215ENST00000524208 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
POLB-215ENST00000524208 ZBTB22O15209 634 aa15.67■□□□□ 0.1
POLB-215ENST00000524208 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
POLB-215ENST00000524208 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
POLB-215ENST00000524208 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
POLB-215ENST00000524208 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
POLB-215ENST00000524208 CAPN15O75808 1086 aa15.49■□□□□ 0.07
POLB-215ENST00000524208 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
POLB-215ENST00000524208 DSG3P32926 999 aa15.4■□□□□ 0.06
POLB-215ENST00000524208 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
POLB-215ENST00000524208 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
POLB-215ENST00000524208 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
POLB-215ENST00000524208 POTEHQ6S545 545 aa15.26■□□□□ 0.03
POLB-215ENST00000524208 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
POLB-215ENST00000524208 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
POLB-215ENST00000524208 APLP2Q06481 763 aa15.15■□□□□ 0.02
POLB-215ENST00000524208 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
POLB-215ENST00000524208 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
POLB-215ENST00000524208 ABCB7O75027 752 aa15.09■□□□□ 0.01
POLB-215ENST00000524208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
POLB-215ENST00000524208 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
POLB-215ENST00000524208 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
POLB-215ENST00000524208 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
POLB-215ENST00000524208 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
POLB-215ENST00000524208 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
POLB-215ENST00000524208 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
POLB-215ENST00000524208 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
POLB-215ENST00000524208 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
POLB-215ENST00000524208 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
POLB-215ENST00000524208 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
POLB-215ENST00000524208 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
POLB-215ENST00000524208 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
POLB-215ENST00000524208 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
POLB-215ENST00000524208 WIZO95785 1651 aa14.68□□□□□ -0.06
POLB-215ENST00000524208 POLA2Q14181 598 aa14.65□□□□□ -0.06
POLB-215ENST00000524208 NESP48681 1621 aa14.65□□□□□ -0.06
POLB-215ENST00000524208 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
POLB-215ENST00000524208 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
POLB-215ENST00000524208 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
POLB-215ENST00000524208 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
POLB-215ENST00000524208 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
POLB-215ENST00000524208 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
POLB-215ENST00000524208 CUX2O14529 1486 aa14.47□□□□□ -0.09
POLB-215ENST00000524208 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.09
POLB-215ENST00000524208 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
POLB-215ENST00000524208 CFTRP13569 1480 aa14.38□□□□□ -0.11
POLB-215ENST00000524208 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
POLB-215ENST00000524208 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
POLB-215ENST00000524208 FKBP8Q14318 412 aa14.33□□□□□ -0.12
POLB-215ENST00000524208 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
POLB-215ENST00000524208 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
POLB-215ENST00000524208 WDR62O43379 1518 aa14.32□□□□□ -0.12
POLB-215ENST00000524208 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
POLB-215ENST00000524208 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
POLB-215ENST00000524208 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
POLB-215ENST00000524208 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
POLB-215ENST00000524208 FBLN2P98095 1184 aa14.25□□□□□ -0.13
POLB-215ENST00000524208 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms