RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
SPIDR-225ENST00000524141 NEFLP07196 543 aa14.56□□□□□ -0.08
SPIDR-225ENST00000524141 FKBP8Q14318 412 aa14.55□□□□□ -0.08
SPIDR-225ENST00000524141 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
SPIDR-225ENST00000524141 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
SPIDR-225ENST00000524141 CFAP43Q8NDM7 1665 aa14.54□□□□□ -0.08
SPIDR-225ENST00000524141 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
SPIDR-225ENST00000524141 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
SPIDR-225ENST00000524141 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-225ENST00000524141 BCANQ96GW7 911 aa14.51□□□□□ -0.09
SPIDR-225ENST00000524141 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
SPIDR-225ENST00000524141 IGF1RP08069 1367 aa14.49□□□□□ -0.09
SPIDR-225ENST00000524141 ANP32CO43423 234 aa14.48□□□□□ -0.09
SPIDR-225ENST00000524141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
SPIDR-225ENST00000524141 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.09
SPIDR-225ENST00000524141 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
SPIDR-225ENST00000524141 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
SPIDR-225ENST00000524141 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
SPIDR-225ENST00000524141 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
SPIDR-225ENST00000524141 FYCO1Q9BQS8 1478 aa14.42□□□□□ -0.1
SPIDR-225ENST00000524141 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
SPIDR-225ENST00000524141 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
SPIDR-225ENST00000524141 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPIDR-225ENST00000524141 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
SPIDR-225ENST00000524141 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
SPIDR-225ENST00000524141 BCL11AQ9H165 835 aa14.38□□□□□ -0.11
SPIDR-225ENST00000524141 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
SPIDR-225ENST00000524141 UACAQ9BZF9 1416 aa14.33□□□□□ -0.11
SPIDR-225ENST00000524141 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.11
SPIDR-225ENST00000524141 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.12
SPIDR-225ENST00000524141 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
SPIDR-225ENST00000524141 HIRIP3Q9BW71 556 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-225ENST00000524141 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
SPIDR-225ENST00000524141 FHOD3Q2V2M9 1422 aa14.31□□□□□ -0.12
SPIDR-225ENST00000524141 FANCIQ9NVI1 1328 aa14.3□□□□□ -0.12
SPIDR-225ENST00000524141 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
SPIDR-225ENST00000524141 PTPN23Q9H3S7 1636 aa14.29□□□□□ -0.12
SPIDR-225ENST00000524141 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
SPIDR-225ENST00000524141 CTTNBP2Q8WZ74 1663 aa14.29□□□□□ -0.12
SPIDR-225ENST00000524141 ERICH6BQ5W0A0 696 aa14.28□□□□□ -0.12
SPIDR-225ENST00000524141 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
SPIDR-225ENST00000524141 CUL7Q14999 1698 aa14.28□□□□□ -0.12
SPIDR-225ENST00000524141 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-225ENST00000524141 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
SPIDR-225ENST00000524141 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
SPIDR-225ENST00000524141 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
SPIDR-225ENST00000524141 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
SPIDR-225ENST00000524141 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
SPIDR-225ENST00000524141 NAIPQ13075 1403 aa14.23□□□□□ -0.13
SPIDR-225ENST00000524141 KDM5BQ9UGL1 1544 aa14.22□□□□□ -0.13
SPIDR-225ENST00000524141 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
SPIDR-225ENST00000524141 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
SPIDR-225ENST00000524141 MSH5O43196 834 aa14.21□□□□□ -0.13
SPIDR-225ENST00000524141 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.14
SPIDR-225ENST00000524141 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
SPIDR-225ENST00000524141 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
SPIDR-225ENST00000524141 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
SPIDR-225ENST00000524141 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
SPIDR-225ENST00000524141 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
SPIDR-225ENST00000524141 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
SPIDR-225ENST00000524141 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
SPIDR-225ENST00000524141 HECW1Q76N89 1606 aa14.17□□□□□ -0.14
SPIDR-225ENST00000524141 PPP4R2Q9NY27 417 aa14.17□□□□□ -0.14
SPIDR-225ENST00000524141 SAMD9Q5K651 1589 aa14.16□□□□□ -0.14
SPIDR-225ENST00000524141 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
SPIDR-225ENST00000524141 CNTLNQ9NXG0 1405 aa14.16□□□□□ -0.14
SPIDR-225ENST00000524141 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
SPIDR-225ENST00000524141 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-225ENST00000524141 LRRIQ1Q96JM4 1722 aa14.14□□□□□ -0.15
SPIDR-225ENST00000524141 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
SPIDR-225ENST00000524141 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
SPIDR-225ENST00000524141 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.153e-7■■□□□ 12.5
SPIDR-225ENST00000524141 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
SPIDR-225ENST00000524141 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
SPIDR-225ENST00000524141 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
SPIDR-225ENST00000524141 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
SPIDR-225ENST00000524141 UGGT2Q9NYU1 1516 aa14.12□□□□□ -0.15
SPIDR-225ENST00000524141 IRX6P78412 446 aaPredicted RBP14.12□□□□□ -0.15
SPIDR-225ENST00000524141 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
SPIDR-225ENST00000524141 TCOF1Q13428 1488 aaKnown RBP14.1□□□□□ -0.15
SPIDR-225ENST00000524141 ZBED9Q6R2W3 1325 aa14.09□□□□□ -0.15
SPIDR-225ENST00000524141 NCOA1Q15788 1441 aa14.08□□□□□ -0.15
SPIDR-225ENST00000524141 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-225ENST00000524141 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-225ENST00000524141 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-225ENST00000524141 CCDC7Q96M83 1385 aa14.06□□□□□ -0.16
SPIDR-225ENST00000524141 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
SPIDR-225ENST00000524141 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
SPIDR-225ENST00000524141 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
SPIDR-225ENST00000524141 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
SPIDR-225ENST00000524141 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
SPIDR-225ENST00000524141 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
SPIDR-225ENST00000524141 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
SPIDR-225ENST00000524141 MPHOSPH9Q99550 1183 aa14.01□□□□□ -0.17
SPIDR-225ENST00000524141 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
SPIDR-225ENST00000524141 RPRD2Q5VT52 1461 aaKnown RBP14□□□□□ -0.17
SPIDR-225ENST00000524141 KDM6BO15054 1643 aa13.99□□□□□ -0.17
SPIDR-225ENST00000524141 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
SPIDR-225ENST00000524141 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
SPIDR-225ENST00000524141 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms