RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 FHOD3Q2V2M9 1422 aa12.48□□□□□ -0.41
SREK1-215ENST00000524111 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
SREK1-215ENST00000524111 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
SREK1-215ENST00000524111 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
SREK1-215ENST00000524111 PRXQ9BXM0 1461 aa12.46□□□□□ -0.42
SREK1-215ENST00000524111 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
SREK1-215ENST00000524111 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
SREK1-215ENST00000524111 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
SREK1-215ENST00000524111 BCANQ96GW7 911 aa12.41□□□□□ -0.42
SREK1-215ENST00000524111 RAB3GAP2Q9H2M9 1393 aa12.41□□□□□ -0.42
SREK1-215ENST00000524111 ARHGAP35Q9NRY4 1499 aa12.41□□□□□ -0.42
SREK1-215ENST00000524111 DHX57Q6P158 1386 aaKnown RBP12.4□□□□□ -0.42
SREK1-215ENST00000524111 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
SREK1-215ENST00000524111 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
SREK1-215ENST00000524111 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
SREK1-215ENST00000524111 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
SREK1-215ENST00000524111 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
SREK1-215ENST00000524111 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
SREK1-215ENST00000524111 FOXD1Q16676 465 aa12.32□□□□□ -0.44
SREK1-215ENST00000524111 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
SREK1-215ENST00000524111 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
SREK1-215ENST00000524111 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
SREK1-215ENST00000524111 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
SREK1-215ENST00000524111 ANP32CO43423 234 aa12.3□□□□□ -0.44
SREK1-215ENST00000524111 NEFLP07196 543 aa12.29□□□□□ -0.44
SREK1-215ENST00000524111 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
SREK1-215ENST00000524111 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
SREK1-215ENST00000524111 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
SREK1-215ENST00000524111 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.443e-10■■□□□ 11.4
SREK1-215ENST00000524111 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
SREK1-215ENST00000524111 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
SREK1-215ENST00000524111 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
SREK1-215ENST00000524111 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
SREK1-215ENST00000524111 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
SREK1-215ENST00000524111 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
SREK1-215ENST00000524111 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
SREK1-215ENST00000524111 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
SREK1-215ENST00000524111 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
SREK1-215ENST00000524111 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
SREK1-215ENST00000524111 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
SREK1-215ENST00000524111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.462e-7■■■□□ 16.1
SREK1-215ENST00000524111 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
SREK1-215ENST00000524111 FKBP8Q14318 412 aa12.17□□□□□ -0.46
SREK1-215ENST00000524111 PPP1R15AO75807 674 aaPredicted RBP12.17□□□□□ -0.46
SREK1-215ENST00000524111 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
SREK1-215ENST00000524111 HNRNPUQ00839 825 aaKnown RBP eCLIP12.16□□□□□ -0.46
SREK1-215ENST00000524111 DNMBPQ6XZF7 1577 aa12.15□□□□□ -0.46
SREK1-215ENST00000524111 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
SREK1-215ENST00000524111 TIAM1Q13009 1591 aa12.15□□□□□ -0.46
SREK1-215ENST00000524111 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
SREK1-215ENST00000524111 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
SREK1-215ENST00000524111 PLEKHD1A6NEE1 506 aa12.14□□□□□ -0.47
SREK1-215ENST00000524111 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
SREK1-215ENST00000524111 PCF11O94913 1555 aaKnown RBP12.12□□□□□ -0.47
SREK1-215ENST00000524111 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
SREK1-215ENST00000524111 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
SREK1-215ENST00000524111 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
SREK1-215ENST00000524111 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
SREK1-215ENST00000524111 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
SREK1-215ENST00000524111 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
SREK1-215ENST00000524111 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
SREK1-215ENST00000524111 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
SREK1-215ENST00000524111 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
SREK1-215ENST00000524111 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
SREK1-215ENST00000524111 NCOA2Q15596 1464 aa12.08□□□□□ -0.48
SREK1-215ENST00000524111 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
SREK1-215ENST00000524111 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
SREK1-215ENST00000524111 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
SREK1-215ENST00000524111 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
SREK1-215ENST00000524111 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
SREK1-215ENST00000524111 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
SREK1-215ENST00000524111 PKD2Q13563 968 aa12.03□□□□□ -0.48
SREK1-215ENST00000524111 HNRNPMP52272 730 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■■■■□ 25
SREK1-215ENST00000524111 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
SREK1-215ENST00000524111 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
SREK1-215ENST00000524111 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
SREK1-215ENST00000524111 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
SREK1-215ENST00000524111 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
SREK1-215ENST00000524111 PTPRKQ15262 1439 aa12□□□□□ -0.49
SREK1-215ENST00000524111 GRIN2BQ13224 1484 aa12□□□□□ -0.49
SREK1-215ENST00000524111 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
SREK1-215ENST00000524111 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
SREK1-215ENST00000524111 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
SREK1-215ENST00000524111 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
SREK1-215ENST00000524111 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
SREK1-215ENST00000524111 UACAQ9BZF9 1416 aa11.97□□□□□ -0.49
SREK1-215ENST00000524111 PRG4Q92954 1404 aaPredicted RBP11.96□□□□□ -0.49
SREK1-215ENST00000524111 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
SREK1-215ENST00000524111 NAIPQ13075 1403 aa11.96□□□□□ -0.49
SREK1-215ENST00000524111 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.5
SREK1-215ENST00000524111 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
SREK1-215ENST00000524111 NUP155O75694 1391 aa11.95□□□□□ -0.5
SREK1-215ENST00000524111 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
SREK1-215ENST00000524111 CUL7Q14999 1698 aa11.93□□□□□ -0.5
SREK1-215ENST00000524111 EPRSP07814 1512 aaKnown RBP11.93□□□□□ -0.5
SREK1-215ENST00000524111 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
SREK1-215ENST00000524111 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
SREK1-215ENST00000524111 TMC1Q8TDI8 760 aa11.91□□□□□ -0.5
SREK1-215ENST00000524111 NBPF8Q3BBV2 869 aa11.91□□□□□ -0.5
SREK1-215ENST00000524111 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms