RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
POLB-212ENST00000522297 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
POLB-212ENST00000522297 AQRO60306 1485 aaKnown RBP eCLIP15.56■□□□□ 0.08
POLB-212ENST00000522297 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
POLB-212ENST00000522297 SOGA1O94964 1423 aa15.55■□□□□ 0.08
POLB-212ENST00000522297 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
POLB-212ENST00000522297 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
POLB-212ENST00000522297 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
POLB-212ENST00000522297 CUX1P39880 1505 aa15.5■□□□□ 0.07
POLB-212ENST00000522297 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
POLB-212ENST00000522297 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
POLB-212ENST00000522297 FBLN2P98095 1184 aa15.48■□□□□ 0.07
POLB-212ENST00000522297 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
POLB-212ENST00000522297 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
POLB-212ENST00000522297 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
POLB-212ENST00000522297 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
POLB-212ENST00000522297 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
POLB-212ENST00000522297 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
POLB-212ENST00000522297 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
POLB-212ENST00000522297 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
POLB-212ENST00000522297 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.05
POLB-212ENST00000522297 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
POLB-212ENST00000522297 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
POLB-212ENST00000522297 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
POLB-212ENST00000522297 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
POLB-212ENST00000522297 CYB5RLQ6IPT4 315 aa15.29■□□□□ 0.04
POLB-212ENST00000522297 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
POLB-212ENST00000522297 SYNJ1O43426 1573 aa15.27■□□□□ 0.03
POLB-212ENST00000522297 CHD1O14646 1710 aa15.26■□□□□ 0.03
POLB-212ENST00000522297 TOP2BQ02880 1626 aa15.26■□□□□ 0.03
POLB-212ENST00000522297 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
POLB-212ENST00000522297 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
POLB-212ENST00000522297 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
POLB-212ENST00000522297 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
POLB-212ENST00000522297 ARAP1Q96P48 1450 aa15.15■□□□□ 0.02
POLB-212ENST00000522297 FKBP8Q14318 412 aa15.15■□□□□ 0.02
POLB-212ENST00000522297 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
POLB-212ENST00000522297 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
POLB-212ENST00000522297 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
POLB-212ENST00000522297 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
POLB-212ENST00000522297 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
POLB-212ENST00000522297 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
POLB-212ENST00000522297 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
POLB-212ENST00000522297 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
POLB-212ENST00000522297 IGF1RP08069 1367 aa15.09■□□□□ 0.01
POLB-212ENST00000522297 NUP160Q12769 1436 aa15.08■□□□□ 0
POLB-212ENST00000522297 ADAMTS12P58397 1594 aa15.07■□□□□ 0
POLB-212ENST00000522297 KIF27Q86VH2 1401 aa15.05■□□□□ -0
POLB-212ENST00000522297 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
POLB-212ENST00000522297 CEP170Q5SW79 1584 aa15.03■□□□□ -0
POLB-212ENST00000522297 JPH4Q96JJ6 628 aa15.03■□□□□ -0
POLB-212ENST00000522297 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
POLB-212ENST00000522297 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
POLB-212ENST00000522297 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
POLB-212ENST00000522297 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
POLB-212ENST00000522297 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
POLB-212ENST00000522297 PROM2Q8N271 834 aa14.93□□□□□ -0.02
POLB-212ENST00000522297 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
POLB-212ENST00000522297 KIAA0586Q9BVV6 1533 aa14.9□□□□□ -0.02
POLB-212ENST00000522297 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
POLB-212ENST00000522297 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
POLB-212ENST00000522297 CUL7Q14999 1698 aa14.87□□□□□ -0.03
POLB-212ENST00000522297 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
POLB-212ENST00000522297 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
POLB-212ENST00000522297 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
POLB-212ENST00000522297 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
POLB-212ENST00000522297 PTPRGP23470 1445 aa14.78□□□□□ -0.04
POLB-212ENST00000522297 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
POLB-212ENST00000522297 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
POLB-212ENST00000522297 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
POLB-212ENST00000522297 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
POLB-212ENST00000522297 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
POLB-212ENST00000522297 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
POLB-212ENST00000522297 DISP1Q96F81 1524 aa14.69□□□□□ -0.06
POLB-212ENST00000522297 ADCY10Q96PN6 1610 aa14.67□□□□□ -0.06
POLB-212ENST00000522297 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
POLB-212ENST00000522297 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
POLB-212ENST00000522297 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
POLB-212ENST00000522297 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
POLB-212ENST00000522297 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
POLB-212ENST00000522297 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
POLB-212ENST00000522297 MAPKBP1O60336 1514 aa14.62□□□□□ -0.07
POLB-212ENST00000522297 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
POLB-212ENST00000522297 ABCC2Q92887 1545 aa14.61□□□□□ -0.07
POLB-212ENST00000522297 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
POLB-212ENST00000522297 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
POLB-212ENST00000522297 EEA1Q15075 1411 aa14.58□□□□□ -0.08
POLB-212ENST00000522297 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
POLB-212ENST00000522297 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
POLB-212ENST00000522297 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
POLB-212ENST00000522297 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
POLB-212ENST00000522297 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
POLB-212ENST00000522297 KIF13AQ9H1H9 1805 aa14.55□□□□□ -0.08
POLB-212ENST00000522297 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
POLB-212ENST00000522297 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
POLB-212ENST00000522297 KDM5BQ9UGL1 1544 aa14.53□□□□□ -0.08
POLB-212ENST00000522297 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
POLB-212ENST00000522297 CTTNBP2Q8WZ74 1663 aa14.51□□□□□ -0.09
POLB-212ENST00000522297 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
POLB-212ENST00000522297 CLEC11AQ9Y240 323 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms