RNA–Protein interactions for RNA: ENST00000521954.1

NECAB1-203, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 2

Gene NECAB1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-203ENST00000521954 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
NECAB1-203ENST00000521954 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
NECAB1-203ENST00000521954 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
NECAB1-203ENST00000521954 CHD1O14646 1710 aa13.97□□□□□ -0.17
NECAB1-203ENST00000521954 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
NECAB1-203ENST00000521954 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
NECAB1-203ENST00000521954 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
NECAB1-203ENST00000521954 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
NECAB1-203ENST00000521954 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
NECAB1-203ENST00000521954 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
NECAB1-203ENST00000521954 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
NECAB1-203ENST00000521954 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
NECAB1-203ENST00000521954 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
NECAB1-203ENST00000521954 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
NECAB1-203ENST00000521954 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
NECAB1-203ENST00000521954 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
NECAB1-203ENST00000521954 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
NECAB1-203ENST00000521954 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
NECAB1-203ENST00000521954 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
NECAB1-203ENST00000521954 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.2
NECAB1-203ENST00000521954 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
NECAB1-203ENST00000521954 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
NECAB1-203ENST00000521954 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
NECAB1-203ENST00000521954 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
NECAB1-203ENST00000521954 PROM2Q8N271 834 aa13.74□□□□□ -0.21
NECAB1-203ENST00000521954 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
NECAB1-203ENST00000521954 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
NECAB1-203ENST00000521954 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
NECAB1-203ENST00000521954 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
NECAB1-203ENST00000521954 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
NECAB1-203ENST00000521954 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
NECAB1-203ENST00000521954 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
NECAB1-203ENST00000521954 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
NECAB1-203ENST00000521954 SOGA1O94964 1423 aa13.57□□□□□ -0.24
NECAB1-203ENST00000521954 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
NECAB1-203ENST00000521954 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
NECAB1-203ENST00000521954 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
NECAB1-203ENST00000521954 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
NECAB1-203ENST00000521954 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
NECAB1-203ENST00000521954 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
NECAB1-203ENST00000521954 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
NECAB1-203ENST00000521954 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
NECAB1-203ENST00000521954 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
NECAB1-203ENST00000521954 CUX1P39880 1505 aa13.52□□□□□ -0.25
NECAB1-203ENST00000521954 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
NECAB1-203ENST00000521954 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
NECAB1-203ENST00000521954 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
NECAB1-203ENST00000521954 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
NECAB1-203ENST00000521954 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
NECAB1-203ENST00000521954 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
NECAB1-203ENST00000521954 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
NECAB1-203ENST00000521954 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
NECAB1-203ENST00000521954 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
NECAB1-203ENST00000521954 NUP160Q12769 1436 aa13.38□□□□□ -0.27
NECAB1-203ENST00000521954 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
NECAB1-203ENST00000521954 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
NECAB1-203ENST00000521954 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
NECAB1-203ENST00000521954 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
NECAB1-203ENST00000521954 DIP2BQ9P265 1576 aa13.3□□□□□ -0.28
NECAB1-203ENST00000521954 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
NECAB1-203ENST00000521954 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
NECAB1-203ENST00000521954 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
NECAB1-203ENST00000521954 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
NECAB1-203ENST00000521954 MIER1Q8N108 512 aa13.27□□□□□ -0.29
NECAB1-203ENST00000521954 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
NECAB1-203ENST00000521954 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
NECAB1-203ENST00000521954 KDM6BO15054 1643 aa13.24□□□□□ -0.29
NECAB1-203ENST00000521954 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
NECAB1-203ENST00000521954 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
NECAB1-203ENST00000521954 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
NECAB1-203ENST00000521954 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
NECAB1-203ENST00000521954 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
NECAB1-203ENST00000521954 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
NECAB1-203ENST00000521954 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
NECAB1-203ENST00000521954 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
NECAB1-203ENST00000521954 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
NECAB1-203ENST00000521954 TOP2BQ02880 1626 aa13.18□□□□□ -0.3
NECAB1-203ENST00000521954 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
NECAB1-203ENST00000521954 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
NECAB1-203ENST00000521954 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
NECAB1-203ENST00000521954 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.3
NECAB1-203ENST00000521954 PPRC1Q5VV67 1664 aaKnown RBP13.16□□□□□ -0.3
NECAB1-203ENST00000521954 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
NECAB1-203ENST00000521954 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
NECAB1-203ENST00000521954 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
NECAB1-203ENST00000521954 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
NECAB1-203ENST00000521954 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
NECAB1-203ENST00000521954 HECW2Q9P2P5 1572 aa13.08□□□□□ -0.32
NECAB1-203ENST00000521954 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
NECAB1-203ENST00000521954 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
NECAB1-203ENST00000521954 GLI2P10070 1586 aa13.03□□□□□ -0.32
NECAB1-203ENST00000521954 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECAB1-203ENST00000521954 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
NECAB1-203ENST00000521954 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
NECAB1-203ENST00000521954 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
NECAB1-203ENST00000521954 CUL7Q14999 1698 aa13.01□□□□□ -0.33
NECAB1-203ENST00000521954 KIAA0586Q9BVV6 1533 aa13□□□□□ -0.33
NECAB1-203ENST00000521954 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
NECAB1-203ENST00000521954 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
NECAB1-203ENST00000521954 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms