RNA–Protein interactions for RNA: ENST00000521954.1

NECAB1-203, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 2

Gene NECAB1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-203ENST00000521954 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
NECAB1-203ENST00000521954 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
NECAB1-203ENST00000521954 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
NECAB1-203ENST00000521954 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
NECAB1-203ENST00000521954 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
NECAB1-203ENST00000521954 FOXD1Q16676 465 aa19.41■□□□□ 0.7
NECAB1-203ENST00000521954 ADRA2BP18089 450 aa18.71■□□□□ 0.59
NECAB1-203ENST00000521954 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
NECAB1-203ENST00000521954 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
NECAB1-203ENST00000521954 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
NECAB1-203ENST00000521954 MSH5O43196 834 aa17.88■□□□□ 0.45
NECAB1-203ENST00000521954 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
NECAB1-203ENST00000521954 ABCC9O60706 1549 aa17.26■□□□□ 0.35
NECAB1-203ENST00000521954 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
NECAB1-203ENST00000521954 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
NECAB1-203ENST00000521954 KCNA4P22459 653 aa16.95■□□□□ 0.3
NECAB1-203ENST00000521954 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
NECAB1-203ENST00000521954 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
NECAB1-203ENST00000521954 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
NECAB1-203ENST00000521954 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
NECAB1-203ENST00000521954 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
NECAB1-203ENST00000521954 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
NECAB1-203ENST00000521954 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
NECAB1-203ENST00000521954 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
NECAB1-203ENST00000521954 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
NECAB1-203ENST00000521954 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
NECAB1-203ENST00000521954 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
NECAB1-203ENST00000521954 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
NECAB1-203ENST00000521954 NACADO15069 1562 aa16.06■□□□□ 0.16
NECAB1-203ENST00000521954 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
NECAB1-203ENST00000521954 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
NECAB1-203ENST00000521954 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
NECAB1-203ENST00000521954 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
NECAB1-203ENST00000521954 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
NECAB1-203ENST00000521954 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
NECAB1-203ENST00000521954 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
NECAB1-203ENST00000521954 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
NECAB1-203ENST00000521954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
NECAB1-203ENST00000521954 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
NECAB1-203ENST00000521954 ZBTB22O15209 634 aa15.59■□□□□ 0.09
NECAB1-203ENST00000521954 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
NECAB1-203ENST00000521954 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
NECAB1-203ENST00000521954 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
NECAB1-203ENST00000521954 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.08
NECAB1-203ENST00000521954 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
NECAB1-203ENST00000521954 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
NECAB1-203ENST00000521954 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
NECAB1-203ENST00000521954 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
NECAB1-203ENST00000521954 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
NECAB1-203ENST00000521954 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
NECAB1-203ENST00000521954 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
NECAB1-203ENST00000521954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
NECAB1-203ENST00000521954 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
NECAB1-203ENST00000521954 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
NECAB1-203ENST00000521954 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
NECAB1-203ENST00000521954 CUX2O14529 1486 aa15.07■□□□□ 0
NECAB1-203ENST00000521954 APLP2Q06481 763 aa15.03■□□□□ -0
NECAB1-203ENST00000521954 ATXN8OSP0DMR3 200 aa15.01□□□□□ -0.01
NECAB1-203ENST00000521954 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
NECAB1-203ENST00000521954 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
NECAB1-203ENST00000521954 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
NECAB1-203ENST00000521954 CAPN15O75808 1086 aa14.9□□□□□ -0.02
NECAB1-203ENST00000521954 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
NECAB1-203ENST00000521954 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
NECAB1-203ENST00000521954 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
NECAB1-203ENST00000521954 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
NECAB1-203ENST00000521954 NESP48681 1621 aa14.77□□□□□ -0.05
NECAB1-203ENST00000521954 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.05
NECAB1-203ENST00000521954 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
NECAB1-203ENST00000521954 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
NECAB1-203ENST00000521954 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
NECAB1-203ENST00000521954 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
NECAB1-203ENST00000521954 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
NECAB1-203ENST00000521954 ABCB7O75027 752 aa14.62□□□□□ -0.07
NECAB1-203ENST00000521954 DSG3P32926 999 aa14.6□□□□□ -0.07
NECAB1-203ENST00000521954 POLA2Q14181 598 aa14.58□□□□□ -0.08
NECAB1-203ENST00000521954 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
NECAB1-203ENST00000521954 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
NECAB1-203ENST00000521954 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
NECAB1-203ENST00000521954 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
NECAB1-203ENST00000521954 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
NECAB1-203ENST00000521954 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
NECAB1-203ENST00000521954 WDR62O43379 1518 aa14.41□□□□□ -0.1
NECAB1-203ENST00000521954 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
NECAB1-203ENST00000521954 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
NECAB1-203ENST00000521954 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
NECAB1-203ENST00000521954 FBLN2P98095 1184 aa14.32□□□□□ -0.12
NECAB1-203ENST00000521954 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
NECAB1-203ENST00000521954 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
NECAB1-203ENST00000521954 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
NECAB1-203ENST00000521954 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
NECAB1-203ENST00000521954 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
NECAB1-203ENST00000521954 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
NECAB1-203ENST00000521954 WIZO95785 1651 aa14.2□□□□□ -0.14
NECAB1-203ENST00000521954 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
NECAB1-203ENST00000521954 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
NECAB1-203ENST00000521954 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
NECAB1-203ENST00000521954 CFTRP13569 1480 aa14.11□□□□□ -0.15
NECAB1-203ENST00000521954 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
NECAB1-203ENST00000521954 FKBP8Q14318 412 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms