RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
SDC2-203ENST00000519587 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
SDC2-203ENST00000519587 FBLN2P98095 1184 aa23.18■■□□□ 1.3
SDC2-203ENST00000519587 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
SDC2-203ENST00000519587 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
SDC2-203ENST00000519587 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
SDC2-203ENST00000519587 NUP160Q12769 1436 aa23.08■■□□□ 1.29
SDC2-203ENST00000519587 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
SDC2-203ENST00000519587 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
SDC2-203ENST00000519587 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
SDC2-203ENST00000519587 KIAA0586Q9BVV6 1533 aa23■■□□□ 1.27
SDC2-203ENST00000519587 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
SDC2-203ENST00000519587 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
SDC2-203ENST00000519587 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
SDC2-203ENST00000519587 SHROOM2Q13796 1616 aa22.9■■□□□ 1.26
SDC2-203ENST00000519587 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
SDC2-203ENST00000519587 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
SDC2-203ENST00000519587 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
SDC2-203ENST00000519587 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
SDC2-203ENST00000519587 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
SDC2-203ENST00000519587 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
SDC2-203ENST00000519587 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
SDC2-203ENST00000519587 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
SDC2-203ENST00000519587 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
SDC2-203ENST00000519587 CLIP1P30622 1438 aa22.73■■□□□ 1.23
SDC2-203ENST00000519587 DISP1Q96F81 1524 aa22.72■■□□□ 1.23
SDC2-203ENST00000519587 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.22
SDC2-203ENST00000519587 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
SDC2-203ENST00000519587 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
SDC2-203ENST00000519587 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
SDC2-203ENST00000519587 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
SDC2-203ENST00000519587 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
SDC2-203ENST00000519587 PTPRGP23470 1445 aa22.55■■□□□ 1.2
SDC2-203ENST00000519587 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
SDC2-203ENST00000519587 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
SDC2-203ENST00000519587 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
SDC2-203ENST00000519587 ABCA8O94911 1581 aa22.45■■□□□ 1.18
SDC2-203ENST00000519587 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
SDC2-203ENST00000519587 HECW1Q76N89 1606 aa22.44■■□□□ 1.18
SDC2-203ENST00000519587 ABCC2Q92887 1545 aa22.42■■□□□ 1.18
SDC2-203ENST00000519587 FYCO1Q9BQS8 1478 aa22.42■■□□□ 1.18
SDC2-203ENST00000519587 UACAQ9BZF9 1416 aa22.42■■□□□ 1.18
SDC2-203ENST00000519587 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
SDC2-203ENST00000519587 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
SDC2-203ENST00000519587 KIF13AQ9H1H9 1805 aa22.4■■□□□ 1.18
SDC2-203ENST00000519587 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
SDC2-203ENST00000519587 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
SDC2-203ENST00000519587 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
SDC2-203ENST00000519587 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
SDC2-203ENST00000519587 ZCCHC11Q5TAX3 1644 aaKnown RBP22.28■■□□□ 1.16
SDC2-203ENST00000519587 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
SDC2-203ENST00000519587 EPRSP07814 1512 aaKnown RBP22.27■■□□□ 1.16
SDC2-203ENST00000519587 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
SDC2-203ENST00000519587 LRRIQ1Q96JM4 1722 aa22.27■■□□□ 1.16
SDC2-203ENST00000519587 CFAP43Q8NDM7 1665 aa22.26■■□□□ 1.15
SDC2-203ENST00000519587 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
SDC2-203ENST00000519587 CDK13Q14004 1512 aaKnown RBP22.22■■□□□ 1.15
SDC2-203ENST00000519587 APLP2Q06481 763 aa22.21■■□□□ 1.15
SDC2-203ENST00000519587 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
SDC2-203ENST00000519587 ATP10BO94823 1461 aa22.21■■□□□ 1.15
SDC2-203ENST00000519587 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
SDC2-203ENST00000519587 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
SDC2-203ENST00000519587 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
SDC2-203ENST00000519587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
SDC2-203ENST00000519587 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
SDC2-203ENST00000519587 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
SDC2-203ENST00000519587 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
SDC2-203ENST00000519587 ABCC10Q5T3U5 1492 aa22.14■■□□□ 1.13
SDC2-203ENST00000519587 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
SDC2-203ENST00000519587 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
SDC2-203ENST00000519587 KDM6BO15054 1643 aa22.12■■□□□ 1.13
SDC2-203ENST00000519587 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
SDC2-203ENST00000519587 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
SDC2-203ENST00000519587 DIP2BQ9P265 1576 aa22.11■■□□□ 1.13
SDC2-203ENST00000519587 ASXL2Q76L83 1435 aa22.1■■□□□ 1.13
SDC2-203ENST00000519587 MTUS2Q5JR59 1369 aa22.09■■□□□ 1.13
SDC2-203ENST00000519587 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
SDC2-203ENST00000519587 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
SDC2-203ENST00000519587 KIF14Q15058 1648 aa22.07■■□□□ 1.12
SDC2-203ENST00000519587 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
SDC2-203ENST00000519587 MAGI3Q5TCQ9 1506 aa22.04■■□□□ 1.12
SDC2-203ENST00000519587 SUPT6HQ7KZ85 1726 aaKnown RBP22.03■■□□□ 1.12
SDC2-203ENST00000519587 TSPOAP1O95153 1857 aa21.99■■□□□ 1.11
SDC2-203ENST00000519587 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
SDC2-203ENST00000519587 GLI2P10070 1586 aa21.95■■□□□ 1.1
SDC2-203ENST00000519587 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
SDC2-203ENST00000519587 ITSN2Q9NZM3 1697 aa21.92■■□□□ 1.1
SDC2-203ENST00000519587 TTC37Q6PGP7 1564 aa21.92■■□□□ 1.1
SDC2-203ENST00000519587 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
SDC2-203ENST00000519587 KCNH8Q96L42 1107 aa21.92■■□□□ 1.1
SDC2-203ENST00000519587 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
SDC2-203ENST00000519587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.91■■□□□ 1.1
SDC2-203ENST00000519587 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
SDC2-203ENST00000519587 PREX2Q70Z35 1606 aa21.87■■□□□ 1.09
SDC2-203ENST00000519587 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
SDC2-203ENST00000519587 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
SDC2-203ENST00000519587 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
SDC2-203ENST00000519587 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
SDC2-203ENST00000519587 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
SDC2-203ENST00000519587 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms