RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
SH2D4A-204ENST00000519207 CHD1O14646 1710 aa15.28■□□□□ 0.04
SH2D4A-204ENST00000519207 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
SH2D4A-204ENST00000519207 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
SH2D4A-204ENST00000519207 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
SH2D4A-204ENST00000519207 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
SH2D4A-204ENST00000519207 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
SH2D4A-204ENST00000519207 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
SH2D4A-204ENST00000519207 PRXQ9BXM0 1461 aa15.23■□□□□ 0.03
SH2D4A-204ENST00000519207 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
SH2D4A-204ENST00000519207 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
SH2D4A-204ENST00000519207 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
SH2D4A-204ENST00000519207 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
SH2D4A-204ENST00000519207 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
SH2D4A-204ENST00000519207 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
SH2D4A-204ENST00000519207 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
SH2D4A-204ENST00000519207 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
SH2D4A-204ENST00000519207 APLP2Q06481 763 aa15.14■□□□□ 0.01
SH2D4A-204ENST00000519207 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
SH2D4A-204ENST00000519207 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
SH2D4A-204ENST00000519207 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
SH2D4A-204ENST00000519207 PBRM1Q86U86 1689 aa15.08■□□□□ 0
SH2D4A-204ENST00000519207 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
SH2D4A-204ENST00000519207 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
SH2D4A-204ENST00000519207 SENP3Q9H4L4 574 aaPredicted RBP15.02□□□□□ -0.01
SH2D4A-204ENST00000519207 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
SH2D4A-204ENST00000519207 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
SH2D4A-204ENST00000519207 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
SH2D4A-204ENST00000519207 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
SH2D4A-204ENST00000519207 IGF1RP08069 1367 aa14.99□□□□□ -0.01
SH2D4A-204ENST00000519207 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
SH2D4A-204ENST00000519207 ADAMTS12P58397 1594 aa14.96□□□□□ -0.02
SH2D4A-204ENST00000519207 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
SH2D4A-204ENST00000519207 NUP160Q12769 1436 aa14.95□□□□□ -0.02
SH2D4A-204ENST00000519207 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
SH2D4A-204ENST00000519207 ERCC6L2Q5T890 1561 aa14.93□□□□□ -0.02
SH2D4A-204ENST00000519207 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
SH2D4A-204ENST00000519207 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
SH2D4A-204ENST00000519207 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
SH2D4A-204ENST00000519207 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
SH2D4A-204ENST00000519207 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
SH2D4A-204ENST00000519207 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
SH2D4A-204ENST00000519207 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
SH2D4A-204ENST00000519207 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
SH2D4A-204ENST00000519207 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
SH2D4A-204ENST00000519207 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
SH2D4A-204ENST00000519207 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
SH2D4A-204ENST00000519207 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
SH2D4A-204ENST00000519207 DHX57Q6P158 1386 aaKnown RBP14.8□□□□□ -0.04
SH2D4A-204ENST00000519207 CUL7Q14999 1698 aa14.79□□□□□ -0.04
SH2D4A-204ENST00000519207 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
SH2D4A-204ENST00000519207 EFCAB5A4FU69 1503 aa14.76□□□□□ -0.05
SH2D4A-204ENST00000519207 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
SH2D4A-204ENST00000519207 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
SH2D4A-204ENST00000519207 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
SH2D4A-204ENST00000519207 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.05
SH2D4A-204ENST00000519207 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
SH2D4A-204ENST00000519207 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
SH2D4A-204ENST00000519207 FYCO1Q9BQS8 1478 aa14.7□□□□□ -0.06
SH2D4A-204ENST00000519207 CASKIN1Q8WXD9 1431 aa14.67□□□□□ -0.06
SH2D4A-204ENST00000519207 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
SH2D4A-204ENST00000519207 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
SH2D4A-204ENST00000519207 FHOD3Q2V2M9 1422 aa14.65□□□□□ -0.06
SH2D4A-204ENST00000519207 FAM69CQ0P6D2 419 aa14.64□□□□□ -0.07
SH2D4A-204ENST00000519207 FMN1Q68DA7 1419 aa14.64□□□□□ -0.07
SH2D4A-204ENST00000519207 KIF13AQ9H1H9 1805 aa14.64□□□□□ -0.07
SH2D4A-204ENST00000519207 RAB3GAP2Q9H2M9 1393 aa14.63□□□□□ -0.07
SH2D4A-204ENST00000519207 SETD5Q9C0A6 1442 aa14.63□□□□□ -0.07
SH2D4A-204ENST00000519207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.07
SH2D4A-204ENST00000519207 ADCY10Q96PN6 1610 aa14.62□□□□□ -0.07
SH2D4A-204ENST00000519207 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
SH2D4A-204ENST00000519207 MIER1Q8N108 512 aa14.62□□□□□ -0.07
SH2D4A-204ENST00000519207 ABCC10Q5T3U5 1492 aa14.61□□□□□ -0.07
SH2D4A-204ENST00000519207 ITGAEP38570 1179 aa14.6□□□□□ -0.07
SH2D4A-204ENST00000519207 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
SH2D4A-204ENST00000519207 MAPKBP1O60336 1514 aa14.59□□□□□ -0.07
SH2D4A-204ENST00000519207 PTPRGP23470 1445 aa14.59□□□□□ -0.07
SH2D4A-204ENST00000519207 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.08
SH2D4A-204ENST00000519207 SUPT16HQ9Y5B9 1047 aaKnown RBP14.56□□□□□ -0.08
SH2D4A-204ENST00000519207 FAM50AQ14320 339 aaKnown RBP14.55□□□□□ -0.08
SH2D4A-204ENST00000519207 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
SH2D4A-204ENST00000519207 CARMIL2Q6F5E8 1435 aa14.55□□□□□ -0.08
SH2D4A-204ENST00000519207 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
SH2D4A-204ENST00000519207 IQGAP2Q13576 1575 aa14.54□□□□□ -0.08
SH2D4A-204ENST00000519207 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
SH2D4A-204ENST00000519207 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
SH2D4A-204ENST00000519207 DISP1Q96F81 1524 aa14.5□□□□□ -0.09
SH2D4A-204ENST00000519207 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
SH2D4A-204ENST00000519207 MTUS2Q5JR59 1369 aa14.49□□□□□ -0.09
SH2D4A-204ENST00000519207 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
SH2D4A-204ENST00000519207 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
SH2D4A-204ENST00000519207 UACAQ9BZF9 1416 aa14.47□□□□□ -0.09
SH2D4A-204ENST00000519207 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 UGGT2Q9NYU1 1516 aa14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 ASXL2Q76L83 1435 aa14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 SUPT6HQ7KZ85 1726 aaKnown RBP14.45□□□□□ -0.1
SH2D4A-204ENST00000519207 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
SH2D4A-204ENST00000519207 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms