RNA–Protein interactions for RNA: ENST00000519189.1

LINC01288-201, Transcript of long intergenic non-protein coding RNA 1288, humanhuman

TSL 4 BASIC

Gene LINC01288, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01288-201ENST00000519189 ERCC6Q03468 1493 aa13.27□□□□□ -0.29
LINC01288-201ENST00000519189 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
LINC01288-201ENST00000519189 CFTRP13569 1480 aa13.23□□□□□ -0.29
LINC01288-201ENST00000519189 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
LINC01288-201ENST00000519189 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
LINC01288-201ENST00000519189 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
LINC01288-201ENST00000519189 FANCD2Q9BXW9 1451 aa13.15□□□□□ -0.3
LINC01288-201ENST00000519189 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
LINC01288-201ENST00000519189 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
LINC01288-201ENST00000519189 MIER1Q8N108 512 aa13.09□□□□□ -0.31
LINC01288-201ENST00000519189 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
LINC01288-201ENST00000519189 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
LINC01288-201ENST00000519189 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
LINC01288-201ENST00000519189 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
LINC01288-201ENST00000519189 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
LINC01288-201ENST00000519189 PRDM2Q13029 1718 aa13.05□□□□□ -0.32
LINC01288-201ENST00000519189 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
LINC01288-201ENST00000519189 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
LINC01288-201ENST00000519189 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
LINC01288-201ENST00000519189 CUX2O14529 1486 aa13.02□□□□□ -0.33
LINC01288-201ENST00000519189 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
LINC01288-201ENST00000519189 PKD2Q13563 968 aa12.99□□□□□ -0.33
LINC01288-201ENST00000519189 WDR62O43379 1518 aa12.98□□□□□ -0.33
LINC01288-201ENST00000519189 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
LINC01288-201ENST00000519189 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
LINC01288-201ENST00000519189 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
LINC01288-201ENST00000519189 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
LINC01288-201ENST00000519189 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
LINC01288-201ENST00000519189 CUX1P39880 1505 aa12.9□□□□□ -0.34
LINC01288-201ENST00000519189 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
LINC01288-201ENST00000519189 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
LINC01288-201ENST00000519189 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
LINC01288-201ENST00000519189 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
LINC01288-201ENST00000519189 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
LINC01288-201ENST00000519189 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
LINC01288-201ENST00000519189 SOGA1O94964 1423 aa12.84□□□□□ -0.35
LINC01288-201ENST00000519189 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
LINC01288-201ENST00000519189 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
LINC01288-201ENST00000519189 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
LINC01288-201ENST00000519189 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
LINC01288-201ENST00000519189 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
LINC01288-201ENST00000519189 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
LINC01288-201ENST00000519189 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
LINC01288-201ENST00000519189 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01288-201ENST00000519189 NUBP1P53384 320 aa12.78□□□□□ -0.36
LINC01288-201ENST00000519189 TARBP1Q13395 1621 aaKnown RBP12.77□□□□□ -0.36
LINC01288-201ENST00000519189 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
LINC01288-201ENST00000519189 TOP2BQ02880 1626 aa12.77□□□□□ -0.37
LINC01288-201ENST00000519189 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
LINC01288-201ENST00000519189 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
LINC01288-201ENST00000519189 GSE1Q14687 1217 aa12.72□□□□□ -0.37
LINC01288-201ENST00000519189 RGL2O15211 777 aa12.7□□□□□ -0.38
LINC01288-201ENST00000519189 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
LINC01288-201ENST00000519189 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
LINC01288-201ENST00000519189 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
LINC01288-201ENST00000519189 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
LINC01288-201ENST00000519189 WDR97A6NE52 1622 aa12.65□□□□□ -0.38
LINC01288-201ENST00000519189 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01288-201ENST00000519189 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
LINC01288-201ENST00000519189 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
LINC01288-201ENST00000519189 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
LINC01288-201ENST00000519189 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
LINC01288-201ENST00000519189 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
LINC01288-201ENST00000519189 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
LINC01288-201ENST00000519189 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
LINC01288-201ENST00000519189 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
LINC01288-201ENST00000519189 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
LINC01288-201ENST00000519189 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC01288-201ENST00000519189 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
LINC01288-201ENST00000519189 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
LINC01288-201ENST00000519189 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
LINC01288-201ENST00000519189 IGF1RP08069 1367 aa12.56□□□□□ -0.4
LINC01288-201ENST00000519189 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
LINC01288-201ENST00000519189 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
LINC01288-201ENST00000519189 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
LINC01288-201ENST00000519189 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
LINC01288-201ENST00000519189 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
LINC01288-201ENST00000519189 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
LINC01288-201ENST00000519189 CHD1O14646 1710 aa12.54□□□□□ -0.4
LINC01288-201ENST00000519189 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
LINC01288-201ENST00000519189 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
LINC01288-201ENST00000519189 SYNJ2O15056 1496 aa12.52□□□□□ -0.41
LINC01288-201ENST00000519189 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.41
LINC01288-201ENST00000519189 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
LINC01288-201ENST00000519189 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
LINC01288-201ENST00000519189 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
LINC01288-201ENST00000519189 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
LINC01288-201ENST00000519189 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
LINC01288-201ENST00000519189 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
LINC01288-201ENST00000519189 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
LINC01288-201ENST00000519189 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
LINC01288-201ENST00000519189 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
LINC01288-201ENST00000519189 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
LINC01288-201ENST00000519189 PYGBP11216 843 aa12.43□□□□□ -0.42
LINC01288-201ENST00000519189 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
LINC01288-201ENST00000519189 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
LINC01288-201ENST00000519189 CEP170Q5SW79 1584 aa12.39□□□□□ -0.43
LINC01288-201ENST00000519189 CUL7Q14999 1698 aa12.39□□□□□ -0.43
LINC01288-201ENST00000519189 NUP160Q12769 1436 aa12.39□□□□□ -0.43
LINC01288-201ENST00000519189 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms