RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
SPIDR-208ENST00000518711 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-208ENST00000518711 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
SPIDR-208ENST00000518711 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
SPIDR-208ENST00000518711 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.74
SPIDR-208ENST00000518711 FGD5Q6ZNL6 1462 aa10.44□□□□□ -0.74
SPIDR-208ENST00000518711 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
SPIDR-208ENST00000518711 HSPA2P54652 639 aa10.4□□□□□ -0.74
SPIDR-208ENST00000518711 CUX1P39880 1505 aa10.39□□□□□ -0.75
SPIDR-208ENST00000518711 PTPRMP28827 1452 aa10.39□□□□□ -0.75
SPIDR-208ENST00000518711 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
SPIDR-208ENST00000518711 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
SPIDR-208ENST00000518711 PPRC1Q5VV67 1664 aaKnown RBP10.35□□□□□ -0.75
SPIDR-208ENST00000518711 NUP160Q12769 1436 aa10.35□□□□□ -0.75
SPIDR-208ENST00000518711 PRG4Q92954 1404 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-208ENST00000518711 GRIN2AQ12879 1464 aa10.33□□□□□ -0.76
SPIDR-208ENST00000518711 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
SPIDR-208ENST00000518711 ADCY10Q96PN6 1610 aa10.32□□□□□ -0.76
SPIDR-208ENST00000518711 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
SPIDR-208ENST00000518711 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
SPIDR-208ENST00000518711 FHAD1B1AJZ9 1412 aa10.3□□□□□ -0.76
SPIDR-208ENST00000518711 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
SPIDR-208ENST00000518711 GLI2P10070 1586 aa10.27□□□□□ -0.76
SPIDR-208ENST00000518711 TEX14Q8IWB6 1497 aa10.27□□□□□ -0.77
SPIDR-208ENST00000518711 ERICH3Q5RHP9 1530 aa10.25□□□□□ -0.77
SPIDR-208ENST00000518711 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
SPIDR-208ENST00000518711 MED1Q15648 1581 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-208ENST00000518711 DMRT2Q9Y5R5 561 aa10.24□□□□□ -0.77
SPIDR-208ENST00000518711 KIF21BO75037 1637 aa10.24□□□□□ -0.77
SPIDR-208ENST00000518711 ADAMTSL3P82987 1691 aa10.24□□□□□ -0.77
SPIDR-208ENST00000518711 PLB1Q6P1J6 1458 aa10.22□□□□□ -0.77
SPIDR-208ENST00000518711 ASXL2Q76L83 1435 aa10.21□□□□□ -0.78
SPIDR-208ENST00000518711 IQSEC2Q5JU85 1478 aa10.17□□□□□ -0.78
SPIDR-208ENST00000518711 BIVM-ERCC5R4GMW8 1640 aa10.17□□□□□ -0.78
SPIDR-208ENST00000518711 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
SPIDR-208ENST00000518711 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
SPIDR-208ENST00000518711 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
SPIDR-208ENST00000518711 PLPPR3Q6T4P5 718 aa10.15□□□□□ -0.78
SPIDR-208ENST00000518711 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
SPIDR-208ENST00000518711 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-208ENST00000518711 MADDQ8WXG6 1647 aa10.13□□□□□ -0.79
SPIDR-208ENST00000518711 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
SPIDR-208ENST00000518711 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
SPIDR-208ENST00000518711 ARID4BQ4LE39 1312 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-208ENST00000518711 HSPA1LP34931 641 aa10.11□□□□□ -0.79
SPIDR-208ENST00000518711 LTBP4Q8N2S1 1624 aa10.1□□□□□ -0.79
SPIDR-208ENST00000518711 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
SPIDR-208ENST00000518711 IGF1RP08069 1367 aa10.09□□□□□ -0.79
SPIDR-208ENST00000518711 BCORL1Q5H9F3 1711 aa10.08□□□□□ -0.8
SPIDR-208ENST00000518711 PTPRTO14522 1441 aa10.07□□□□□ -0.8
SPIDR-208ENST00000518711 PTPRGP23470 1445 aa10.07□□□□□ -0.8
SPIDR-208ENST00000518711 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
SPIDR-208ENST00000518711 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
SPIDR-208ENST00000518711 TNIKQ9UKE5 1360 aa10.04□□□□□ -0.8
SPIDR-208ENST00000518711 STRCQ7RTU9 1775 aa10.04□□□□□ -0.8
SPIDR-208ENST00000518711 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
SPIDR-208ENST00000518711 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
SPIDR-208ENST00000518711 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
SPIDR-208ENST00000518711 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
SPIDR-208ENST00000518711 IFFO2Q5TF58 517 aa10.03□□□□□ -0.8
SPIDR-208ENST00000518711 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-208ENST00000518711 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
SPIDR-208ENST00000518711 MAGI3Q5TCQ9 1506 aa10.01□□□□□ -0.81
SPIDR-208ENST00000518711 CD109Q6YHK3 1445 aa10□□□□□ -0.81
SPIDR-208ENST00000518711 CUL7Q14999 1698 aa10□□□□□ -0.81
SPIDR-208ENST00000518711 CFAP43Q8NDM7 1665 aa9.99□□□□□ -0.81
SPIDR-208ENST00000518711 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
SPIDR-208ENST00000518711 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
SPIDR-208ENST00000518711 PIP4K2BP78356 416 aa9.98□□□□□ -0.81
SPIDR-208ENST00000518711 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
SPIDR-208ENST00000518711 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
SPIDR-208ENST00000518711 SRCAPQ6ZRS2 3230 aa9.96□□□□□ -0.81
SPIDR-208ENST00000518711 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
SPIDR-208ENST00000518711 PREX1Q8TCU6 1659 aa9.93□□□□□ -0.82
SPIDR-208ENST00000518711 POTEAQ6S8J7 498 aa9.92□□□□□ -0.82
SPIDR-208ENST00000518711 IQGAP2Q13576 1575 aa9.92□□□□□ -0.82
SPIDR-208ENST00000518711 ZNF335Q9H4Z2 1342 aaPredicted RBP9.91□□□□□ -0.82
SPIDR-208ENST00000518711 TOM1O60784 492 aa9.91□□□□□ -0.82
SPIDR-208ENST00000518711 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.82
SPIDR-208ENST00000518711 DISP1Q96F81 1524 aa9.91□□□□□ -0.82
SPIDR-208ENST00000518711 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.82
SPIDR-208ENST00000518711 KCNH8Q96L42 1107 aa9.9□□□□□ -0.82
SPIDR-208ENST00000518711 UGGT2Q9NYU1 1516 aa9.9□□□□□ -0.82
SPIDR-208ENST00000518711 WDR7Q9Y4E6 1490 aa9.9□□□□□ -0.83
SPIDR-208ENST00000518711 UHRF1BP1Q6BDS2 1440 aa9.9□□□□□ -0.83
SPIDR-208ENST00000518711 PHLDB1Q86UU1 1377 aa9.88□□□□□ -0.83
SPIDR-208ENST00000518711 CEBPAP49715 358 aaPredicted RBP9.87□□□□□ -0.83
SPIDR-208ENST00000518711 MLECQ14165 292 aa9.86□□□□□ -0.83
SPIDR-208ENST00000518711 TTC37Q6PGP7 1564 aa9.86□□□□□ -0.83
SPIDR-208ENST00000518711 RAPGEF2Q9Y4G8 1499 aa9.85□□□□□ -0.83
SPIDR-208ENST00000518711 ZCCHC11Q5TAX3 1644 aaKnown RBP9.85□□□□□ -0.83
SPIDR-208ENST00000518711 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-208ENST00000518711 FANCAO15360 1455 aa9.83□□□□□ -0.84
SPIDR-208ENST00000518711 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
SPIDR-208ENST00000518711 SETD1AO15047 1707 aaKnown RBP9.82□□□□□ -0.84
SPIDR-208ENST00000518711 KIAA0556O60303 1618 aa9.81□□□□□ -0.84
SPIDR-208ENST00000518711 NCOA1Q15788 1441 aa9.81□□□□□ -0.84
SPIDR-208ENST00000518711 FER1L4A9Z1Z3 1794 aa9.8□□□□□ -0.84
SPIDR-208ENST00000518711 SETD1BQ9UPS6 1966 aaKnown RBP9.79□□□□□ -0.84
SPIDR-208ENST00000518711 ARHGEF40Q8TER5 1519 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms