RNA–Protein interactions for RNA: ENST00000518430.1

GINS4-202, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 515 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-202ENST00000518430 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
GINS4-202ENST00000518430 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
GINS4-202ENST00000518430 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
GINS4-202ENST00000518430 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
GINS4-202ENST00000518430 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
GINS4-202ENST00000518430 CUL7Q14999 1698 aa13.56□□□□□ -0.24
GINS4-202ENST00000518430 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
GINS4-202ENST00000518430 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
GINS4-202ENST00000518430 KIF21BO75037 1637 aa13.54□□□□□ -0.24
GINS4-202ENST00000518430 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
GINS4-202ENST00000518430 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
GINS4-202ENST00000518430 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
GINS4-202ENST00000518430 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
GINS4-202ENST00000518430 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
GINS4-202ENST00000518430 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
GINS4-202ENST00000518430 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
GINS4-202ENST00000518430 FBLN2P98095 1184 aa13.47□□□□□ -0.25
GINS4-202ENST00000518430 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
GINS4-202ENST00000518430 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
GINS4-202ENST00000518430 APLP2Q06481 763 aa13.45□□□□□ -0.26
GINS4-202ENST00000518430 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
GINS4-202ENST00000518430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
GINS4-202ENST00000518430 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
GINS4-202ENST00000518430 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
GINS4-202ENST00000518430 KIAA0586Q9BVV6 1533 aa13.37□□□□□ -0.27
GINS4-202ENST00000518430 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
GINS4-202ENST00000518430 NUP160Q12769 1436 aa13.36□□□□□ -0.27
GINS4-202ENST00000518430 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
GINS4-202ENST00000518430 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
GINS4-202ENST00000518430 CLIP1P30622 1438 aa13.32□□□□□ -0.28
GINS4-202ENST00000518430 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
GINS4-202ENST00000518430 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
GINS4-202ENST00000518430 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
GINS4-202ENST00000518430 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
GINS4-202ENST00000518430 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
GINS4-202ENST00000518430 MIER1Q8N108 512 aa13.27□□□□□ -0.29
GINS4-202ENST00000518430 CARMIL2Q6F5E8 1435 aa13.27□□□□□ -0.29
GINS4-202ENST00000518430 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
GINS4-202ENST00000518430 CHD1O14646 1710 aa13.26□□□□□ -0.29
GINS4-202ENST00000518430 UGGT2Q9NYU1 1516 aa13.25□□□□□ -0.29
GINS4-202ENST00000518430 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
GINS4-202ENST00000518430 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.29
GINS4-202ENST00000518430 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
GINS4-202ENST00000518430 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
GINS4-202ENST00000518430 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
GINS4-202ENST00000518430 PRG4Q92954 1404 aaPredicted RBP13.19□□□□□ -0.3
GINS4-202ENST00000518430 SAMD9Q5K651 1589 aa13.18□□□□□ -0.3
GINS4-202ENST00000518430 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
GINS4-202ENST00000518430 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
GINS4-202ENST00000518430 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
GINS4-202ENST00000518430 FHOD3Q2V2M9 1422 aa13.14□□□□□ -0.31
GINS4-202ENST00000518430 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
GINS4-202ENST00000518430 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
GINS4-202ENST00000518430 PTPRGP23470 1445 aa13.13□□□□□ -0.31
GINS4-202ENST00000518430 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
GINS4-202ENST00000518430 NEFLP07196 543 aa13.1□□□□□ -0.31
GINS4-202ENST00000518430 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
GINS4-202ENST00000518430 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
GINS4-202ENST00000518430 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
GINS4-202ENST00000518430 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
GINS4-202ENST00000518430 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
GINS4-202ENST00000518430 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
GINS4-202ENST00000518430 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
GINS4-202ENST00000518430 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
GINS4-202ENST00000518430 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
GINS4-202ENST00000518430 ERCC6L2Q5T890 1561 aa12.99□□□□□ -0.33
GINS4-202ENST00000518430 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
GINS4-202ENST00000518430 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
GINS4-202ENST00000518430 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
GINS4-202ENST00000518430 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
GINS4-202ENST00000518430 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
GINS4-202ENST00000518430 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
GINS4-202ENST00000518430 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
GINS4-202ENST00000518430 ABCA8O94911 1581 aa12.98□□□□□ -0.33
GINS4-202ENST00000518430 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.33
GINS4-202ENST00000518430 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.34
GINS4-202ENST00000518430 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
GINS4-202ENST00000518430 PLEKHD1A6NEE1 506 aa12.95□□□□□ -0.34
GINS4-202ENST00000518430 UBE2Q2Q8WVN8 375 aa12.94□□□□□ -0.34
GINS4-202ENST00000518430 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
GINS4-202ENST00000518430 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
GINS4-202ENST00000518430 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
GINS4-202ENST00000518430 ATP10BO94823 1461 aa12.91□□□□□ -0.34
GINS4-202ENST00000518430 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
GINS4-202ENST00000518430 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
GINS4-202ENST00000518430 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
GINS4-202ENST00000518430 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
GINS4-202ENST00000518430 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
GINS4-202ENST00000518430 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
GINS4-202ENST00000518430 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
GINS4-202ENST00000518430 FKBP8Q14318 412 aa12.9□□□□□ -0.34
GINS4-202ENST00000518430 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
GINS4-202ENST00000518430 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
GINS4-202ENST00000518430 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
GINS4-202ENST00000518430 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
GINS4-202ENST00000518430 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
GINS4-202ENST00000518430 TROQ12816 1431 aaPredicted RBP12.86□□□□□ -0.35
GINS4-202ENST00000518430 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
GINS4-202ENST00000518430 MSH5O43196 834 aa12.83□□□□□ -0.36
GINS4-202ENST00000518430 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms