RNA–Protein interactions for RNA: ENST00000518131.5

NEFM-204, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-204ENST00000518131 ABCA5Q8WWZ7 1642 aa18.21■□□□□ 0.51
NEFM-204ENST00000518131 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
NEFM-204ENST00000518131 PRXQ9BXM0 1461 aa18.2■□□□□ 0.5
NEFM-204ENST00000518131 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
NEFM-204ENST00000518131 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
NEFM-204ENST00000518131 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
NEFM-204ENST00000518131 KIF21BO75037 1637 aa18.17■□□□□ 0.5
NEFM-204ENST00000518131 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
NEFM-204ENST00000518131 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
NEFM-204ENST00000518131 CUL7Q14999 1698 aa18.11■□□□□ 0.49
NEFM-204ENST00000518131 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
NEFM-204ENST00000518131 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
NEFM-204ENST00000518131 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
NEFM-204ENST00000518131 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
NEFM-204ENST00000518131 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
NEFM-204ENST00000518131 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
NEFM-204ENST00000518131 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
NEFM-204ENST00000518131 FBLN2P98095 1184 aa18■□□□□ 0.47
NEFM-204ENST00000518131 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
NEFM-204ENST00000518131 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
NEFM-204ENST00000518131 CLIP1P30622 1438 aa17.97■□□□□ 0.47
NEFM-204ENST00000518131 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
NEFM-204ENST00000518131 TSHZ2Q9NRE2 1034 aa17.93■□□□□ 0.46
NEFM-204ENST00000518131 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
NEFM-204ENST00000518131 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
NEFM-204ENST00000518131 APLP2Q06481 763 aa17.86■□□□□ 0.45
NEFM-204ENST00000518131 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
NEFM-204ENST00000518131 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.44
NEFM-204ENST00000518131 NUP160Q12769 1436 aa17.82■□□□□ 0.44
NEFM-204ENST00000518131 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
NEFM-204ENST00000518131 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
NEFM-204ENST00000518131 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
NEFM-204ENST00000518131 IQGAP2Q13576 1575 aa17.78■□□□□ 0.44
NEFM-204ENST00000518131 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
NEFM-204ENST00000518131 BCANQ96GW7 911 aa17.75■□□□□ 0.43
NEFM-204ENST00000518131 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
NEFM-204ENST00000518131 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
NEFM-204ENST00000518131 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
NEFM-204ENST00000518131 CHD1O14646 1710 aa17.74■□□□□ 0.43
NEFM-204ENST00000518131 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
NEFM-204ENST00000518131 P3H3Q8IVL6 736 aa17.73■□□□□ 0.43
NEFM-204ENST00000518131 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
NEFM-204ENST00000518131 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
NEFM-204ENST00000518131 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
NEFM-204ENST00000518131 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
NEFM-204ENST00000518131 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
NEFM-204ENST00000518131 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
NEFM-204ENST00000518131 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
NEFM-204ENST00000518131 FMN1Q68DA7 1419 aa17.63■□□□□ 0.41
NEFM-204ENST00000518131 ITGAEP38570 1179 aa17.62■□□□□ 0.41
NEFM-204ENST00000518131 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
NEFM-204ENST00000518131 FKBP8Q14318 412 aa17.61■□□□□ 0.41
NEFM-204ENST00000518131 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
NEFM-204ENST00000518131 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
NEFM-204ENST00000518131 KIAA0556O60303 1618 aa17.58■□□□□ 0.4
NEFM-204ENST00000518131 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
NEFM-204ENST00000518131 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
NEFM-204ENST00000518131 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
NEFM-204ENST00000518131 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
NEFM-204ENST00000518131 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
NEFM-204ENST00000518131 MAPKBP1O60336 1514 aa17.52■□□□□ 0.39
NEFM-204ENST00000518131 PTPRGP23470 1445 aa17.5■□□□□ 0.39
NEFM-204ENST00000518131 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
NEFM-204ENST00000518131 RBM19Q9Y4C8 960 aaKnown RBP17.5■□□□□ 0.39
NEFM-204ENST00000518131 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
NEFM-204ENST00000518131 RAB3GAP2Q9H2M9 1393 aa17.48■□□□□ 0.39
NEFM-204ENST00000518131 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
NEFM-204ENST00000518131 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
NEFM-204ENST00000518131 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
NEFM-204ENST00000518131 TRIM52Q96A61 297 aa17.46■□□□□ 0.38
NEFM-204ENST00000518131 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
NEFM-204ENST00000518131 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
NEFM-204ENST00000518131 PLB1Q6P1J6 1458 aa17.41■□□□□ 0.38
NEFM-204ENST00000518131 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
NEFM-204ENST00000518131 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
NEFM-204ENST00000518131 MSH5O43196 834 aa17.4■□□□□ 0.38
NEFM-204ENST00000518131 CCDC18Q5T9S5 1454 aa17.39■□□□□ 0.37
NEFM-204ENST00000518131 RAPGEF6Q8TEU7 1601 aa17.38■□□□□ 0.37
NEFM-204ENST00000518131 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
NEFM-204ENST00000518131 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
NEFM-204ENST00000518131 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
NEFM-204ENST00000518131 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
NEFM-204ENST00000518131 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
NEFM-204ENST00000518131 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
NEFM-204ENST00000518131 ABCA8O94911 1581 aa17.35■□□□□ 0.37
NEFM-204ENST00000518131 NEFLP07196 543 aa17.35■□□□□ 0.37
NEFM-204ENST00000518131 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
NEFM-204ENST00000518131 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.36
NEFM-204ENST00000518131 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
NEFM-204ENST00000518131 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
NEFM-204ENST00000518131 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
NEFM-204ENST00000518131 CDK13Q14004 1512 aaKnown RBP17.29■□□□□ 0.36
NEFM-204ENST00000518131 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
NEFM-204ENST00000518131 ABCC2Q92887 1545 aa17.28■□□□□ 0.36
NEFM-204ENST00000518131 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
NEFM-204ENST00000518131 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
NEFM-204ENST00000518131 ATP10BO94823 1461 aa17.27■□□□□ 0.36
NEFM-204ENST00000518131 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
NEFM-204ENST00000518131 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
NEFM-204ENST00000518131 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms