RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
SPIDR-204ENST00000517824 CUL7Q14999 1698 aa16.68■□□□□ 0.26
SPIDR-204ENST00000517824 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
SPIDR-204ENST00000517824 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
SPIDR-204ENST00000517824 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
SPIDR-204ENST00000517824 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-204ENST00000517824 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
SPIDR-204ENST00000517824 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-204ENST00000517824 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-204ENST00000517824 APLP2Q06481 763 aa16.6■□□□□ 0.25
SPIDR-204ENST00000517824 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
SPIDR-204ENST00000517824 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
SPIDR-204ENST00000517824 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SPIDR-204ENST00000517824 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-204ENST00000517824 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
SPIDR-204ENST00000517824 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-204ENST00000517824 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
SPIDR-204ENST00000517824 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
SPIDR-204ENST00000517824 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
SPIDR-204ENST00000517824 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
SPIDR-204ENST00000517824 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
SPIDR-204ENST00000517824 IGF1RP08069 1367 aa16.47■□□□□ 0.23
SPIDR-204ENST00000517824 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
SPIDR-204ENST00000517824 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
SPIDR-204ENST00000517824 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
SPIDR-204ENST00000517824 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
SPIDR-204ENST00000517824 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
SPIDR-204ENST00000517824 NUP160Q12769 1436 aa16.36■□□□□ 0.21
SPIDR-204ENST00000517824 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
SPIDR-204ENST00000517824 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
SPIDR-204ENST00000517824 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
SPIDR-204ENST00000517824 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
SPIDR-204ENST00000517824 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
SPIDR-204ENST00000517824 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
SPIDR-204ENST00000517824 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
SPIDR-204ENST00000517824 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
SPIDR-204ENST00000517824 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
SPIDR-204ENST00000517824 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SPIDR-204ENST00000517824 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
SPIDR-204ENST00000517824 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
SPIDR-204ENST00000517824 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-204ENST00000517824 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
SPIDR-204ENST00000517824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-204ENST00000517824 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
SPIDR-204ENST00000517824 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
SPIDR-204ENST00000517824 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
SPIDR-204ENST00000517824 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
SPIDR-204ENST00000517824 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
SPIDR-204ENST00000517824 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-204ENST00000517824 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
SPIDR-204ENST00000517824 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
SPIDR-204ENST00000517824 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
SPIDR-204ENST00000517824 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
SPIDR-204ENST00000517824 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-204ENST00000517824 KIF13AQ9H1H9 1805 aa16.1■□□□□ 0.17
SPIDR-204ENST00000517824 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
SPIDR-204ENST00000517824 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
SPIDR-204ENST00000517824 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
SPIDR-204ENST00000517824 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
SPIDR-204ENST00000517824 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
SPIDR-204ENST00000517824 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
SPIDR-204ENST00000517824 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
SPIDR-204ENST00000517824 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
SPIDR-204ENST00000517824 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
SPIDR-204ENST00000517824 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SPIDR-204ENST00000517824 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIDR-204ENST00000517824 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
SPIDR-204ENST00000517824 DIP2BQ9P265 1576 aa16■□□□□ 0.15
SPIDR-204ENST00000517824 FOXD1Q16676 465 aa15.99■□□□□ 0.15
SPIDR-204ENST00000517824 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
SPIDR-204ENST00000517824 ITGAEP38570 1179 aa15.94■□□□□ 0.14
SPIDR-204ENST00000517824 PTPRGP23470 1445 aa15.94■□□□□ 0.14
SPIDR-204ENST00000517824 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
SPIDR-204ENST00000517824 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
SPIDR-204ENST00000517824 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
SPIDR-204ENST00000517824 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
SPIDR-204ENST00000517824 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
SPIDR-204ENST00000517824 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
SPIDR-204ENST00000517824 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
SPIDR-204ENST00000517824 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
SPIDR-204ENST00000517824 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
SPIDR-204ENST00000517824 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
SPIDR-204ENST00000517824 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
SPIDR-204ENST00000517824 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
SPIDR-204ENST00000517824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPIDR-204ENST00000517824 KDM6BO15054 1643 aa15.86■□□□□ 0.13
SPIDR-204ENST00000517824 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
SPIDR-204ENST00000517824 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
SPIDR-204ENST00000517824 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
SPIDR-204ENST00000517824 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
SPIDR-204ENST00000517824 TSPOAP1O95153 1857 aa15.84■□□□□ 0.13
SPIDR-204ENST00000517824 ASXL2Q76L83 1435 aa15.84■□□□□ 0.13
SPIDR-204ENST00000517824 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.13
SPIDR-204ENST00000517824 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
SPIDR-204ENST00000517824 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
SPIDR-204ENST00000517824 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
SPIDR-204ENST00000517824 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
SPIDR-204ENST00000517824 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
SPIDR-204ENST00000517824 GLI2P10070 1586 aa15.79■□□□□ 0.12
SPIDR-204ENST00000517824 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms