RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 PHGR1C9JFL3 82 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 LCE1CQ5T751 118 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 LCE1EQ5T753 118 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 LURAP1LQ8IV03 231 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 EPPK1P58107 5090 aaKnown RBP0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 ASH1LQ9NR48 2969 aaKnown RBP0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 HERC1Q15751 4861 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 MUC16Q8WXI7 14507 aa0.05□□□□□ -2.4
SCARNA17-201ENST00000516183 FLG2Q5D862 2391 aaPredicted RBP0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 HIVEP2P31629 2446 aa0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 LCE1FQ5T754 118 aa0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 FLNAP21333 2647 aaKnown RBP0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 PTPN13Q12923 2485 aa0.04□□□□□ -2.4
SCARNA17-201ENST00000516183 CREBBPQ92793 2442 aa0.03□□□□□ -2.4
SCARNA17-201ENST00000516183 GAR1Q9NY12 217 aaKnown RBP0.03□□□□□ -2.4
SCARNA17-201ENST00000516183 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.4
SCARNA17-201ENST00000516183 NCOR1O75376 2440 aa0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 STAB2Q8WWQ8 2551 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 BDP1A6H8Y1 2624 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 TRIOBPQ9H2D6 2365 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 PIEZO1Q92508 2521 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP20-1Q3LI63 56 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP5-11Q6L8G4 156 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 KHSRPQ92945 711 aaKnown RBP eCLIP0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 DACH1Q9UI36 760 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 USP24Q9UPU5 2620 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 CUL9Q8IWT3 2517 aa0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 TGM1P22735 817 aa0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 ZCCHC13Q8WW36 166 aaKnown RBP0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 TNMDQ9H2S6 317 aa0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 SETD2Q9BYW2 2564 aaPredicted RBP0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 ACANP16112 2415 aa0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 NAV2Q8IVL1 2488 aa0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 ZFYVE26Q68DK2 2539 aa0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 CHD8Q9HCK8 2581 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 GSC2O15499 205 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 POLQO75417 2590 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 LORP23490 312 aaPredicted RBP0□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP21-1Q3LI58 79 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 ZNF462Q96JM2 2506 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 ABCA2Q9BZC7 2435 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 FHDC1Q9C0D6 1143 aaPredicted RBP0□□□□□ -2.41
SCARNA17-201ENST00000516183 ZSWIM6Q9HCJ5 1215 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 HECTD1Q9ULT8 2610 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 NOTCH3Q9UM47 2321 aa0□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP4-1Q9BYQ7 146 aa-0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 JMJD1CQ15652 2540 aa-0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 USH2AO75445 5202 aa-0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 FAT3Q8TDW7 4589 aa-0.01□□□□□ -2.41
SCARNA17-201ENST00000516183 ONECUT2O95948 504 aa-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP10-9P60411 292 aa-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 KRTAP1-1Q07627 177 aa-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 LSRQ86X29 649 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 FASNP49327 2511 aaKnown RBP-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA17-201ENST00000516183 BPTFQ12830 3046 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 SYNE1Q8NF91 8797 aaKnown RBP-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 FBN1P35555 2871 aaKnown RBP-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 TEP1Q99973 2627 aaKnown RBP-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 COL9A1P20849 921 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 GRIN2CQ14957 1233 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 DNAJC5GQ8N7S2 189 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 HHIPQ96QV1 700 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 FBXL17Q9UF56 701 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 U3KPZ7 1027 aaPredicted RBP-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 FBN2P35556 2912 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 VWFP04275 2813 aa-0.03□□□□□ -2.41
SCARNA17-201ENST00000516183 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 COL7A1Q02388 2944 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP2-3P0C7H8 128 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 COL9A2Q14055 689 aaPredicted RBP-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP2-4Q9BYR9 128 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 DNHD1Q96M86 4753 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 NBEAL2Q6ZNJ1 2754 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 NAV3Q8IVL0 2385 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 HERC2O95714 4834 aa-0.04□□□□□ -2.42
SCARNA17-201ENST00000516183 ZNF469Q96JG9 3925 aaPredicted RBP-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 ABCA12Q86UK0 2595 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 KRT1P04264 644 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 LCE1BQ5T7P3 118 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP1-3Q8IUG1 177 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 SORCS1Q8WY21 1168 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 TAF15Q92804 592 aaKnown RBP eCLIP-0.05□□□□□ -2.429e-16■□□□□ 10
SCARNA17-201ENST00000516183 ACACBO00763 2458 aa-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 HELZ2Q9BYK8 2649 aaKnown RBP-0.05□□□□□ -2.42
SCARNA17-201ENST00000516183 MAST4O15021 2626 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 ATRQ13535 2644 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 ERBB2P04626 1255 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 KRT13P13646 458 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP21-2Q3LI59 83 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP6-3Q3LI67 103 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 UBXN11Q5T124 520 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 LRCH2Q5VUJ6 765 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 MPNDQ8N594 471 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 KRTAP2-1Q9BYU5 128 aa-0.06□□□□□ -2.42
SCARNA17-201ENST00000516183 DHX36Q9H2U1 1008 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms