RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 PSPNO60542 156 aa-0.05□□□□□ -2.42
SCARNA20.2-201ENST00000516052 LCE5AQ5TCM9 118 aa-0.05□□□□□ -2.42
SCARNA20.2-201ENST00000516052 CCER1Q8TC90 406 aaPredicted RBP-0.05□□□□□ -2.42
SCARNA20.2-201ENST00000516052 TENM3Q9P273 2699 aa-0.05□□□□□ -2.42
SCARNA20.2-201ENST00000516052 POTEB3A0JP26 581 aa-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 ERBB2P04626 1255 aa-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 POTEBQ6S5H4 581 aa-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 GLDNQ6ZMI3 551 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 KCTD12Q96CX2 325 aaKnown RBP-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 ANO8Q9HCE9 1232 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA20.2-201ENST00000516052 NEBP20929 6669 aa-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 COBLO75128 1261 aa-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 LORP23490 312 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 LCE1AQ5T7P2 110 aa-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 LCE4AQ5TA78 99 aa-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 CDAN1Q8IWY9 1227 aa-0.07□□□□□ -2.42
SCARNA20.2-201ENST00000516052 MUC6Q6W4X9 2439 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 STAB1Q9NY15 2570 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 ONECUT2O95948 504 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 KRTAP10-1P60331 282 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 KRTAP10-6P60371 365 aaPredicted RBP-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 SPNS2Q8IVW8 549 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 GOLGA2P5Q9HBQ8 144 aa-0.08□□□□□ -2.42
SCARNA20.2-201ENST00000516052 KRTAP21-1Q3LI58 79 aa-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 LCE2AQ5TA79 106 aaPredicted RBP-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 IGSF5Q9NSI5 407 aa-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 TENM4Q6N022 2769 aa-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 TTC28Q96AY4 2481 aa-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 MEGF8Q7Z7M0 2845 aa-0.09□□□□□ -2.42
SCARNA20.2-201ENST00000516052 PHGR1C9JFL3 82 aa-0.1□□□□□ -2.43
SCARNA20.2-201ENST00000516052 GSC2O15499 205 aa-0.1□□□□□ -2.43
SCARNA20.2-201ENST00000516052 LCE3AQ5TA76 89 aa-0.1□□□□□ -2.43
SCARNA20.2-201ENST00000516052 LCE2DQ5TA82 110 aaPredicted RBP-0.1□□□□□ -2.43
SCARNA20.2-201ENST00000516052 MUC2Q02817 5179 aa-0.1□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FLG2Q5D862 2391 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA20.2-201ENST00000516052 POTEB2H3BUK9 544 aa-0.11□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP10-2P60368 255 aa-0.11□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP10-8P60410 259 aa-0.11□□□□□ -2.43
SCARNA20.2-201ENST00000516052 SPRR2GQ9BYE4 73 aa-0.11□□□□□ -2.43
SCARNA20.2-201ENST00000516052 TENM1Q9UKZ4 2725 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KMT2BQ9UMN6 2715 aaPredicted RBP-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 CYSRT1A8MQ03 144 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 COL9A1P20849 921 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 TGM1P22735 817 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP10-12P60413 245 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FZD5Q13467 585 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 Q8N3U1 123 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 ZNF775Q96BV0 537 aaPredicted RBP-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 NAF1Q96HR8 494 aaKnown RBP-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 STK17AQ9UEE5 414 aa-0.12□□□□□ -2.43
SCARNA20.2-201ENST00000516052 NOTCH3Q9UM47 2321 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 MAST4O15021 2626 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 COL7A1Q02388 2944 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 AMHP03971 560 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP10-3P60369 221 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRT32Q14532 448 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 ZNF843Q8N446 348 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 EDAQ92838 391 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 OTUD5Q96G74 571 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 HHIPQ96QV1 700 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 JAG2Q9Y219 1238 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 PCLOQ9Y6V0 5065 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 OTOGLQ3ZCN5 2332 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 RYR3Q15413 4870 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 SALL3Q9BXA9 1300 aa-0.13□□□□□ -2.43
SCARNA20.2-201ENST00000516052 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 LCE2BO14633 110 aa-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 YBX3P16989 372 aaKnown RBP eCLIP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP10-4P60372 401 aaPredicted RBP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 ATG9BQ674R7 924 aa-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 CRIPAKQ8N1N5 446 aa-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 TMEM121BQ9BXQ6 578 aaPredicted RBP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP1-5Q9BYS1 174 aa-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 IRX2Q9BZI1 471 aaPredicted RBP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FBN1P35555 2871 aaKnown RBP-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FBN2P35556 2912 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 SPTBN4Q9H254 2564 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 OVOL3O00110 214 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 EGFRP00533 1210 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRT10P13645 584 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FOXD1Q16676 465 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 BSPRYQ5W0U4 402 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 Q6ZNB5 142 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KCTD17Q8N5Z5 321 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 EMID1Q96A84 441 aaPredicted RBP-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP2-1Q9BYU5 128 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 CAAP1Q9H8G2 361 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 FBXL17Q9UF56 701 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 USP24Q9UPU5 2620 aa-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 RP1L1Q8IWN7 2480 aaPredicted RBP-0.15□□□□□ -2.43
SCARNA20.2-201ENST00000516052 KRTAP29-1A8MX34 341 aaPredicted RBP-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP2-3P0C7H8 128 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TXKP42681 527 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 WASP42768 502 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 LCE2CQ5TA81 110 aa-0.16□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRT77Q7Z794 578 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms