RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 POTEDQ86YR6 584 aa0.35□□□□□ -2.35
SCARNA20.2-201ENST00000516052 PLSCR2Q9NRY7 297 aa0.33□□□□□ -2.36
SCARNA20.2-201ENST00000516052 XP32Q5T750 250 aa0.32□□□□□ -2.36
SCARNA20.2-201ENST00000516052 KRTAP17-1Q9BYP8 105 aa0.32□□□□□ -2.36
SCARNA20.2-201ENST00000516052 KRTAP9-8Q9BYQ0 159 aa0.3□□□□□ -2.36
SCARNA20.2-201ENST00000516052 KRTAP4-5Q9BYR2 181 aa0.27□□□□□ -2.37
SCARNA20.2-201ENST00000516052 KRTAP5-3Q6L8H2 238 aa0.26□□□□□ -2.37
SCARNA20.2-201ENST00000516052 HMCN1Q96RW7 5635 aa0.22□□□□□ -2.37
SCARNA20.2-201ENST00000516052 KRTAP4-4Q9BYR3 166 aa0.22□□□□□ -2.37
SCARNA20.2-201ENST00000516052 KRTAP4-3Q9BYR4 195 aa0.21□□□□□ -2.38
SCARNA20.2-201ENST00000516052 LOC100996750A0A140TA64 210 aa0.19□□□□□ -2.38
SCARNA20.2-201ENST00000516052 POTEHQ6S545 545 aa0.19□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP5-5Q701N2 237 aaPredicted RBP0.19□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP4-6Q9BYQ5 205 aa0.19□□□□□ -2.38
SCARNA20.2-201ENST00000516052 RBAK-RBAKDNI3L0D1 243 aa0.18□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP5-9P26371 169 aa0.18□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP9-9Q9BYP9 154 aa0.18□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP9-3Q9BYQ3 159 aa0.18□□□□□ -2.38
SCARNA20.2-201ENST00000516052 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP5-2Q701N4 177 aa0.16□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP9-2Q9BYQ4 174 aa0.16□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP4-2Q9BYR5 136 aa0.16□□□□□ -2.38
SCARNA20.2-201ENST00000516052 KRTAP5-8O75690 187 aa0.15□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.15□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP1-3Q8IUG1 177 aa0.15□□□□□ -2.39
SCARNA20.2-201ENST00000516052 AHNAKQ09666 5890 aaKnown RBP0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 OBSCNQ5VST9 7968 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-8A0A0G2JLE6 195 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 RGS19P49795 217 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP5-4Q6L8H1 288 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP5-1Q6L8H4 278 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-12Q9BQ66 201 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-7Q9BYR0 210 aa0.14□□□□□ -2.39
SCARNA20.2-201ENST00000516052 MUC5BQ9HC84 5762 aaPredicted RBP0.13□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP9-6A0A140TA67 174 aa0.13□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP9-7A8MTY7 169 aa0.13□□□□□ -2.39
SCARNA20.2-201ENST00000516052 ANKRD17O75179 2603 aaKnown RBP0.13□□□□□ -2.39
SCARNA20.2-201ENST00000516052 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP9-4Q9BYQ2 154 aa0.12□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-11Q9BYQ6 195 aa0.12□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-8Q9BYQ9 185 aa0.12□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP1-1Q07627 177 aa0.1□□□□□ -2.39
SCARNA20.2-201ENST00000516052 KRTAP4-9Q9BYQ8 210 aa0.1□□□□□ -2.39
SCARNA20.2-201ENST00000516052 MUC5ACP98088 5654 aa0.1□□□□□ -2.39
SCARNA20.2-201ENST00000516052 LCE3BQ5TA77 95 aa0.09□□□□□ -2.4
SCARNA20.2-201ENST00000516052 LCE1DQ5T752 114 aa0.08□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KRTAP5-7Q6L8G8 165 aa0.08□□□□□ -2.4
SCARNA20.2-201ENST00000516052 AHNAK2Q8IVF2 5795 aa0.08□□□□□ -2.4
SCARNA20.2-201ENST00000516052 BTBD11A6QL63 1104 aa0.07□□□□□ -2.4
SCARNA20.2-201ENST00000516052 LSRQ86X29 649 aaPredicted RBP0.07□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KRTAP5-11Q6L8G4 156 aa0.06□□□□□ -2.4
SCARNA20.2-201ENST00000516052 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
SCARNA20.2-201ENST00000516052 MUC19Q7Z5P9 8384 aa0.06□□□□□ -2.4
SCARNA20.2-201ENST00000516052 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KRTAP5-10Q6L8G5 202 aa0.05□□□□□ -2.4
SCARNA20.2-201ENST00000516052 PSMG3-AS1Q96PY0 264 aa0.05□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KMT2DO14686 5537 aa0.05□□□□□ -2.4
SCARNA20.2-201ENST00000516052 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
SCARNA20.2-201ENST00000516052 LCE1CQ5T751 118 aa0.04□□□□□ -2.4
SCARNA20.2-201ENST00000516052 LCE1EQ5T753 118 aa0.04□□□□□ -2.4
SCARNA20.2-201ENST00000516052 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
SCARNA20.2-201ENST00000516052 MDN1Q9NU22 5596 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 POTEMA6NI47 508 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KRTAP9-6A8MVA2 160 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 KRTAP10-9P60411 292 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 LAMC2Q13753 1193 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 SUZ12Q15022 739 aaKnown RBP0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 CRCT1Q9UGL9 99 aa0.03□□□□□ -2.4
SCARNA20.2-201ENST00000516052 NOTCH2Q04721 2471 aa0.02□□□□□ -2.41
SCARNA20.2-201ENST00000516052 CAPNS1P04632 268 aa0.02□□□□□ -2.41
SCARNA20.2-201ENST00000516052 FCGBPQ9Y6R7 5405 aaPredicted RBP0.02□□□□□ -2.41
SCARNA20.2-201ENST00000516052 TRIOBPQ9H2D6 2365 aa0.02□□□□□ -2.41
SCARNA20.2-201ENST00000516052 POTEGQ6S5H5 508 aa0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 WDR26Q9H7D7 661 aa0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 MUC16Q8WXI7 14507 aa0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 LHX8Q68G74 356 aa0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 ILDR2Q71H61 639 aa0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 SP7Q8TDD2 431 aaPredicted RBP0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 AVENQ9NQS1 362 aaPredicted RBP0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 PCDH10Q9P2E7 1040 aa0□□□□□ -2.41
SCARNA20.2-201ENST00000516052 ARID1BQ8NFD5 2236 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 KRTAP10-7P60409 375 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 HNRNPA0Q13151 305 aaKnown RBP-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 KRTAP21-2Q3LI59 83 aa-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 LCE1BQ5T7P3 118 aa-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 KRTAP19-1Q8IUB9 90 aa-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 DNAJC5GQ8N7S2 189 aa-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 KRTAP4-1Q9BYQ7 146 aa-0.01□□□□□ -2.41
SCARNA20.2-201ENST00000516052 NTN5Q8WTR8 489 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA20.2-201ENST00000516052 SERINC4A6NH21 518 aa-0.03□□□□□ -2.41
SCARNA20.2-201ENST00000516052 KRTAP4-16G5E9R7 235 aaPredicted RBP-0.03□□□□□ -2.41
SCARNA20.2-201ENST00000516052 LCE1FQ5T754 118 aa-0.03□□□□□ -2.41
SCARNA20.2-201ENST00000516052 FBN3Q75N90 2809 aa-0.03□□□□□ -2.41
SCARNA20.2-201ENST00000516052 NOTCH1P46531 2555 aa-0.04□□□□□ -2.42
SCARNA20.2-201ENST00000516052 CACNB1Q02641 598 aaPredicted RBP-0.04□□□□□ -2.42
SCARNA20.2-201ENST00000516052 MMRN1Q13201 1228 aa-0.04□□□□□ -2.42
SCARNA20.2-201ENST00000516052 COL9A3Q14050 684 aaPredicted RBP-0.04□□□□□ -2.42
SCARNA20.2-201ENST00000516052 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
SCARNA20.2-201ENST00000516052 SPRR5A0A1B0GTR4 108 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms