RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
ERCC6-208ENST00000515869 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
ERCC6-208ENST00000515869 NEFLP07196 543 aa12.39□□□□□ -0.43
ERCC6-208ENST00000515869 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
ERCC6-208ENST00000515869 TRIM52Q96A61 297 aa12.37□□□□□ -0.43
ERCC6-208ENST00000515869 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
ERCC6-208ENST00000515869 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
ERCC6-208ENST00000515869 THOC2Q8NI27 1593 aaKnown RBP12.36□□□□□ -0.43
ERCC6-208ENST00000515869 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
ERCC6-208ENST00000515869 ERICH6Q7L0X2 663 aa12.34□□□□□ -0.43
ERCC6-208ENST00000515869 KIF21AQ7Z4S6 1674 aa12.34□□□□□ -0.43
ERCC6-208ENST00000515869 RAB3GAP2Q9H2M9 1393 aa12.34□□□□□ -0.43
ERCC6-208ENST00000515869 RRBP1Q9P2E9 1410 aaKnown RBP12.32□□□□□ -0.44
ERCC6-208ENST00000515869 KIF27Q86VH2 1401 aa12.31□□□□□ -0.44
ERCC6-208ENST00000515869 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
ERCC6-208ENST00000515869 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
ERCC6-208ENST00000515869 RBM19Q9Y4C8 960 aaKnown RBP12.3□□□□□ -0.44
ERCC6-208ENST00000515869 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
ERCC6-208ENST00000515869 ANP32CO43423 234 aa12.28□□□□□ -0.44
ERCC6-208ENST00000515869 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
ERCC6-208ENST00000515869 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
ERCC6-208ENST00000515869 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
ERCC6-208ENST00000515869 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
ERCC6-208ENST00000515869 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
ERCC6-208ENST00000515869 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
ERCC6-208ENST00000515869 CUX1P39880 1505 aa12.24□□□□□ -0.45
ERCC6-208ENST00000515869 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
ERCC6-208ENST00000515869 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
ERCC6-208ENST00000515869 CFTRP13569 1480 aa12.23□□□□□ -0.45
ERCC6-208ENST00000515869 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
ERCC6-208ENST00000515869 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
ERCC6-208ENST00000515869 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
ERCC6-208ENST00000515869 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
ERCC6-208ENST00000515869 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
ERCC6-208ENST00000515869 WDR97A6NE52 1622 aa12.21□□□□□ -0.45
ERCC6-208ENST00000515869 MAPKBP1O60336 1514 aa12.21□□□□□ -0.46
ERCC6-208ENST00000515869 IGF1RP08069 1367 aa12.2□□□□□ -0.46
ERCC6-208ENST00000515869 WDR62O43379 1518 aa12.2□□□□□ -0.46
ERCC6-208ENST00000515869 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
ERCC6-208ENST00000515869 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
ERCC6-208ENST00000515869 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
ERCC6-208ENST00000515869 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
ERCC6-208ENST00000515869 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
ERCC6-208ENST00000515869 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
ERCC6-208ENST00000515869 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
ERCC6-208ENST00000515869 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
ERCC6-208ENST00000515869 MSH5O43196 834 aa12.13□□□□□ -0.47
ERCC6-208ENST00000515869 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
ERCC6-208ENST00000515869 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
ERCC6-208ENST00000515869 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
ERCC6-208ENST00000515869 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
ERCC6-208ENST00000515869 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
ERCC6-208ENST00000515869 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
ERCC6-208ENST00000515869 TIAM1Q13009 1591 aa12.08□□□□□ -0.47
ERCC6-208ENST00000515869 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
ERCC6-208ENST00000515869 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
ERCC6-208ENST00000515869 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
ERCC6-208ENST00000515869 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
ERCC6-208ENST00000515869 SENP3Q9H4L4 574 aaPredicted RBP12.04□□□□□ -0.48
ERCC6-208ENST00000515869 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
ERCC6-208ENST00000515869 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
ERCC6-208ENST00000515869 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
ERCC6-208ENST00000515869 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.48
ERCC6-208ENST00000515869 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
ERCC6-208ENST00000515869 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
ERCC6-208ENST00000515869 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
ERCC6-208ENST00000515869 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
ERCC6-208ENST00000515869 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
ERCC6-208ENST00000515869 FOXD1Q16676 465 aa11.99□□□□□ -0.49
ERCC6-208ENST00000515869 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
ERCC6-208ENST00000515869 CCDC184Q52MB2 194 aa11.98□□□□□ -0.49
ERCC6-208ENST00000515869 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
ERCC6-208ENST00000515869 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
ERCC6-208ENST00000515869 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.49
ERCC6-208ENST00000515869 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
ERCC6-208ENST00000515869 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
ERCC6-208ENST00000515869 MRS2Q9HD23 443 aa11.96□□□□□ -0.5
ERCC6-208ENST00000515869 PCF11O94913 1555 aaKnown RBP11.95□□□□□ -0.5
ERCC6-208ENST00000515869 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
ERCC6-208ENST00000515869 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
ERCC6-208ENST00000515869 NBR1Q14596 966 aa11.94□□□□□ -0.5
ERCC6-208ENST00000515869 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
ERCC6-208ENST00000515869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.5
ERCC6-208ENST00000515869 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
ERCC6-208ENST00000515869 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-208ENST00000515869 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
ERCC6-208ENST00000515869 PTPRKQ15262 1439 aa11.91□□□□□ -0.5
ERCC6-208ENST00000515869 DEKP35659 375 aaKnown RBP11.9□□□□□ -0.5
ERCC6-208ENST00000515869 PRKRIP1Q9H875 184 aaPredicted RBP11.88□□□□□ -0.51
ERCC6-208ENST00000515869 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
ERCC6-208ENST00000515869 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
ERCC6-208ENST00000515869 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
ERCC6-208ENST00000515869 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
ERCC6-208ENST00000515869 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
ERCC6-208ENST00000515869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
ERCC6-208ENST00000515869 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
ERCC6-208ENST00000515869 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
ERCC6-208ENST00000515869 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
ERCC6-208ENST00000515869 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
ERCC6-208ENST00000515869 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms