RNA–Protein interactions for RNA: ENST00000515013.5

PRDM8-210, Transcript of PR/SET domain 8, humanhuman

TSL 1 (best)

Gene PRDM8, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-210ENST00000515013 ITGAEP38570 1179 aa29.75■■■□□ 2.35
PRDM8-210ENST00000515013 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
PRDM8-210ENST00000515013 NESP48681 1621 aa29.71■■■□□ 2.35
PRDM8-210ENST00000515013 P3H3Q8IVL6 736 aa29.7■■■□□ 2.34
PRDM8-210ENST00000515013 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
PRDM8-210ENST00000515013 RRBP1Q9P2E9 1410 aaKnown RBP29.67■■■□□ 2.34
PRDM8-210ENST00000515013 NEFLP07196 543 aa29.64■■■□□ 2.33
PRDM8-210ENST00000515013 CCNB3Q8WWL7 1395 aa29.61■■■□□ 2.33
PRDM8-210ENST00000515013 MSH5O43196 834 aa29.56■■■□□ 2.32
PRDM8-210ENST00000515013 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
PRDM8-210ENST00000515013 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
PRDM8-210ENST00000515013 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
PRDM8-210ENST00000515013 TOPBP1Q92547 1522 aa29.52■■■□□ 2.32
PRDM8-210ENST00000515013 DDX10Q13206 875 aaKnown RBP29.5■■■□□ 2.31
PRDM8-210ENST00000515013 TIAM1Q13009 1591 aa29.5■■■□□ 2.31
PRDM8-210ENST00000515013 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
PRDM8-210ENST00000515013 FHOD3Q2V2M9 1422 aa29.44■■■□□ 2.3
PRDM8-210ENST00000515013 PHLDB1Q86UU1 1377 aa29.43■■■□□ 2.3
PRDM8-210ENST00000515013 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
PRDM8-210ENST00000515013 MAPKBP1O60336 1514 aa29.42■■■□□ 2.3
PRDM8-210ENST00000515013 LRRC9Q6ZRR7 1453 aa29.41■■■□□ 2.3
PRDM8-210ENST00000515013 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
PRDM8-210ENST00000515013 PCF11O94913 1555 aaKnown RBP29.39■■■□□ 2.3
PRDM8-210ENST00000515013 TRIM52Q96A61 297 aa29.39■■■□□ 2.3
PRDM8-210ENST00000515013 FANCIQ9NVI1 1328 aa29.39■■■□□ 2.29
PRDM8-210ENST00000515013 CCER2I3L3R5 266 aa29.38■■■□□ 2.29
PRDM8-210ENST00000515013 RAB3GAP2Q9H2M9 1393 aa29.37■■■□□ 2.29
PRDM8-210ENST00000515013 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
PRDM8-210ENST00000515013 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
PRDM8-210ENST00000515013 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
PRDM8-210ENST00000515013 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
PRDM8-210ENST00000515013 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
PRDM8-210ENST00000515013 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
PRDM8-210ENST00000515013 ERICH6Q7L0X2 663 aa29.25■■■□□ 2.27
PRDM8-210ENST00000515013 ANP32CO43423 234 aa29.25■■■□□ 2.27
PRDM8-210ENST00000515013 CFAP43Q8NDM7 1665 aa29.22■■■□□ 2.27
PRDM8-210ENST00000515013 CDK11AQ9UQ88 783 aaPredicted RBP29.2■■■□□ 2.27
PRDM8-210ENST00000515013 SIN3AQ96ST3 1273 aa29.19■■■□□ 2.26
PRDM8-210ENST00000515013 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
PRDM8-210ENST00000515013 SETD5Q9C0A6 1442 aa29.19■■■□□ 2.26
PRDM8-210ENST00000515013 CUL7Q14999 1698 aa29.18■■■□□ 2.26
PRDM8-210ENST00000515013 CTTNBP2Q8WZ74 1663 aa29.16■■■□□ 2.26
PRDM8-210ENST00000515013 CASKIN1Q8WXD9 1431 aa29.14■■■□□ 2.26
PRDM8-210ENST00000515013 MYT1LQ9UL68 1186 aa29.14■■■□□ 2.26
PRDM8-210ENST00000515013 FYCO1Q9BQS8 1478 aa29.14■■■□□ 2.25
PRDM8-210ENST00000515013 EFCAB5A4FU69 1503 aa29.13■■■□□ 2.25
PRDM8-210ENST00000515013 HIRIP3Q9BW71 556 aaPredicted RBP29.13■■■□□ 2.25
PRDM8-210ENST00000515013 TIMELESSQ9UNS1 1208 aa29.12■■■□□ 2.25
PRDM8-210ENST00000515013 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
PRDM8-210ENST00000515013 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
PRDM8-210ENST00000515013 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
PRDM8-210ENST00000515013 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
PRDM8-210ENST00000515013 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
PRDM8-210ENST00000515013 PRKCSHP14314 528 aaPredicted RBP29.03■■■□□ 2.24
PRDM8-210ENST00000515013 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
PRDM8-210ENST00000515013 IRX6P78412 446 aaPredicted RBP29.01■■■□□ 2.24
PRDM8-210ENST00000515013 FMN1Q68DA7 1419 aa29.01■■■□□ 2.24
PRDM8-210ENST00000515013 DEKP35659 375 aaKnown RBP29■■■□□ 2.23
PRDM8-210ENST00000515013 MTUS2Q5JR59 1369 aa28.98■■■□□ 2.23
PRDM8-210ENST00000515013 LRRIQ1Q96JM4 1722 aa28.97■■■□□ 2.23
PRDM8-210ENST00000515013 HNRNPUQ00839 825 aaKnown RBP eCLIP28.95■■■□□ 2.22
PRDM8-210ENST00000515013 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.22
PRDM8-210ENST00000515013 SAMD9Q5K651 1589 aa28.93■■■□□ 2.22
PRDM8-210ENST00000515013 ERICH6BQ5W0A0 696 aa28.93■■■□□ 2.22
PRDM8-210ENST00000515013 PTPRKQ15262 1439 aa28.92■■■□□ 2.22
PRDM8-210ENST00000515013 TARBP1Q13395 1621 aaKnown RBP28.9■■■□□ 2.22
PRDM8-210ENST00000515013 PPP4R2Q9NY27 417 aa28.88■■■□□ 2.21
PRDM8-210ENST00000515013 ARID3CA6NKF2 412 aa28.87■■■□□ 2.21
PRDM8-210ENST00000515013 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
PRDM8-210ENST00000515013 NCOA2Q15596 1464 aa28.84■■■□□ 2.21
PRDM8-210ENST00000515013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
PRDM8-210ENST00000515013 MAGI3Q5TCQ9 1506 aa28.79■■■□□ 2.2
PRDM8-210ENST00000515013 CCDC18Q5T9S5 1454 aa28.76■■■□□ 2.2
PRDM8-210ENST00000515013 MYOM3Q5VTT5 1437 aa28.75■■■□□ 2.19
PRDM8-210ENST00000515013 TONSLQ96HA7 1378 aa28.75■■■□□ 2.19
PRDM8-210ENST00000515013 NOP58Q9Y2X3 529 aaKnown RBP28.73■■■□□ 2.19
PRDM8-210ENST00000515013 PBRM1Q86U86 1689 aa28.73■■■□□ 2.19
PRDM8-210ENST00000515013 CHIC2Q9UKJ5 165 aa28.72■■■□□ 2.19
PRDM8-210ENST00000515013 HFM1A2PYH4 1435 aa28.7■■■□□ 2.18
PRDM8-210ENST00000515013 RRP7BPQ9NSQ0 103 aa28.69■■■□□ 2.18
PRDM8-210ENST00000515013 PTPN23Q9H3S7 1636 aa28.68■■■□□ 2.18
PRDM8-210ENST00000515013 NAIPQ13075 1403 aa28.68■■■□□ 2.18
PRDM8-210ENST00000515013 SUPT6HQ7KZ85 1726 aaKnown RBP28.68■■■□□ 2.18
PRDM8-210ENST00000515013 B4GALNT3Q6L9W6 998 aa28.68■■■□□ 2.18
PRDM8-210ENST00000515013 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
PRDM8-210ENST00000515013 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
PRDM8-210ENST00000515013 NBR1Q14596 966 aa28.66■■■□□ 2.18
PRDM8-210ENST00000515013 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.18
PRDM8-210ENST00000515013 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.18
PRDM8-210ENST00000515013 IQGAP2Q13576 1575 aa28.64■■■□□ 2.18
PRDM8-210ENST00000515013 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
PRDM8-210ENST00000515013 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
PRDM8-210ENST00000515013 PAK3O75914 559 aaPredicted RBP28.63■■■□□ 2.17
PRDM8-210ENST00000515013 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
PRDM8-210ENST00000515013 UACAQ9BZF9 1416 aa28.62■■■□□ 2.17
PRDM8-210ENST00000515013 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
PRDM8-210ENST00000515013 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
PRDM8-210ENST00000515013 ANO8Q9HCE9 1232 aaPredicted RBP28.55■■■□□ 2.16
PRDM8-210ENST00000515013 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
PRDM8-210ENST00000515013 HECW1Q76N89 1606 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms