RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
CCL28-203ENST00000513525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCL28-203ENST00000513525 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
CCL28-203ENST00000513525 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
CCL28-203ENST00000513525 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
CCL28-203ENST00000513525 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
CCL28-203ENST00000513525 FBLN2P98095 1184 aa17.47■□□□□ 0.39
CCL28-203ENST00000513525 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
CCL28-203ENST00000513525 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
CCL28-203ENST00000513525 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
CCL28-203ENST00000513525 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
CCL28-203ENST00000513525 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
CCL28-203ENST00000513525 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
CCL28-203ENST00000513525 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
CCL28-203ENST00000513525 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
CCL28-203ENST00000513525 FHAD1B1AJZ9 1412 aa17.27■□□□□ 0.36
CCL28-203ENST00000513525 NUP160Q12769 1436 aa17.26■□□□□ 0.35
CCL28-203ENST00000513525 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
CCL28-203ENST00000513525 ERCC6L2Q5T890 1561 aa17.17■□□□□ 0.34
CCL28-203ENST00000513525 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
CCL28-203ENST00000513525 CUL7Q14999 1698 aa17.16■□□□□ 0.34
CCL28-203ENST00000513525 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
CCL28-203ENST00000513525 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
CCL28-203ENST00000513525 IGF1RP08069 1367 aa17.06■□□□□ 0.32
CCL28-203ENST00000513525 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
CCL28-203ENST00000513525 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
CCL28-203ENST00000513525 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
CCL28-203ENST00000513525 JPH4Q96JJ6 628 aa17■□□□□ 0.31
CCL28-203ENST00000513525 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
CCL28-203ENST00000513525 POTEHQ6S545 545 aa16.97■□□□□ 0.31
CCL28-203ENST00000513525 CAPN15O75808 1086 aa16.96■□□□□ 0.3
CCL28-203ENST00000513525 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
CCL28-203ENST00000513525 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
CCL28-203ENST00000513525 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
CCL28-203ENST00000513525 DSG3P32926 999 aa16.91■□□□□ 0.3
CCL28-203ENST00000513525 ADCY10Q96PN6 1610 aa16.9■□□□□ 0.3
CCL28-203ENST00000513525 CTTNBP2Q8WZ74 1663 aa16.86■□□□□ 0.29
CCL28-203ENST00000513525 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
CCL28-203ENST00000513525 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
CCL28-203ENST00000513525 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
CCL28-203ENST00000513525 CARMIL2Q6F5E8 1435 aa16.82■□□□□ 0.28
CCL28-203ENST00000513525 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
CCL28-203ENST00000513525 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
CCL28-203ENST00000513525 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
CCL28-203ENST00000513525 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
CCL28-203ENST00000513525 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.28
CCL28-203ENST00000513525 PTPRGP23470 1445 aa16.76■□□□□ 0.27
CCL28-203ENST00000513525 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCL28-203ENST00000513525 KIAA0556O60303 1618 aa16.75■□□□□ 0.27
CCL28-203ENST00000513525 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
CCL28-203ENST00000513525 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
CCL28-203ENST00000513525 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
CCL28-203ENST00000513525 APLP2Q06481 763 aa16.7■□□□□ 0.26
CCL28-203ENST00000513525 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
CCL28-203ENST00000513525 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
CCL28-203ENST00000513525 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
CCL28-203ENST00000513525 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
CCL28-203ENST00000513525 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
CCL28-203ENST00000513525 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
CCL28-203ENST00000513525 GLI2P10070 1586 aa16.64■□□□□ 0.25
CCL28-203ENST00000513525 TTBK1Q5TCY1 1321 aaPredicted RBP16.63■□□□□ 0.25
CCL28-203ENST00000513525 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
CCL28-203ENST00000513525 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
CCL28-203ENST00000513525 ASXL2Q76L83 1435 aa16.61■□□□□ 0.25
CCL28-203ENST00000513525 EEA1Q15075 1411 aa16.6■□□□□ 0.25
CCL28-203ENST00000513525 KDM6BO15054 1643 aa16.6■□□□□ 0.25
CCL28-203ENST00000513525 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
CCL28-203ENST00000513525 ABCA8O94911 1581 aa16.58■□□□□ 0.25
CCL28-203ENST00000513525 MAP3K4Q9Y6R4 1608 aa16.58■□□□□ 0.24
CCL28-203ENST00000513525 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
CCL28-203ENST00000513525 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
CCL28-203ENST00000513525 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
CCL28-203ENST00000513525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
CCL28-203ENST00000513525 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
CCL28-203ENST00000513525 KIF21BO75037 1637 aa16.51■□□□□ 0.23
CCL28-203ENST00000513525 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
CCL28-203ENST00000513525 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
CCL28-203ENST00000513525 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CCL28-203ENST00000513525 ABCB7O75027 752 aa16.45■□□□□ 0.22
CCL28-203ENST00000513525 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
CCL28-203ENST00000513525 TEX14Q8IWB6 1497 aa16.45■□□□□ 0.22
CCL28-203ENST00000513525 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
CCL28-203ENST00000513525 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
CCL28-203ENST00000513525 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
CCL28-203ENST00000513525 ATP10BO94823 1461 aa16.38■□□□□ 0.21
CCL28-203ENST00000513525 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
CCL28-203ENST00000513525 KCNA4P22459 653 aa16.37■□□□□ 0.21
CCL28-203ENST00000513525 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
CCL28-203ENST00000513525 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
CCL28-203ENST00000513525 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
CCL28-203ENST00000513525 CD109Q6YHK3 1445 aa16.35■□□□□ 0.21
CCL28-203ENST00000513525 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
CCL28-203ENST00000513525 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.21
CCL28-203ENST00000513525 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
CCL28-203ENST00000513525 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
CCL28-203ENST00000513525 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
CCL28-203ENST00000513525 ARAP3Q8WWN8 1544 aa16.26■□□□□ 0.19
CCL28-203ENST00000513525 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
CCL28-203ENST00000513525 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
CCL28-203ENST00000513525 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms