RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 MROH2BQ7Z745 1585 aa9.68□□□□□ -0.86
HTT-211ENST00000513326 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.86
HTT-211ENST00000513326 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
HTT-211ENST00000513326 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
HTT-211ENST00000513326 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
HTT-211ENST00000513326 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
HTT-211ENST00000513326 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
HTT-211ENST00000513326 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
HTT-211ENST00000513326 FANCD2Q9BXW9 1451 aa9.57□□□□□ -0.88
HTT-211ENST00000513326 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
HTT-211ENST00000513326 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
HTT-211ENST00000513326 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
HTT-211ENST00000513326 WIZO95785 1651 aa9.55□□□□□ -0.88
HTT-211ENST00000513326 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
HTT-211ENST00000513326 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
HTT-211ENST00000513326 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
HTT-211ENST00000513326 MIER1Q8N108 512 aa9.51□□□□□ -0.89
HTT-211ENST00000513326 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
HTT-211ENST00000513326 CFTRP13569 1480 aa9.49□□□□□ -0.89
HTT-211ENST00000513326 CYB5RLQ6IPT4 315 aa9.49□□□□□ -0.89
HTT-211ENST00000513326 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
HTT-211ENST00000513326 ARAP1Q96P48 1450 aa9.47□□□□□ -0.89
HTT-211ENST00000513326 PLEKHG5O94827 1062 aa9.46□□□□□ -0.9
HTT-211ENST00000513326 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
HTT-211ENST00000513326 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
HTT-211ENST00000513326 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
HTT-211ENST00000513326 PKD2Q13563 968 aa9.42□□□□□ -0.9
HTT-211ENST00000513326 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
HTT-211ENST00000513326 CHD1O14646 1710 aa9.4□□□□□ -0.9
HTT-211ENST00000513326 IFT140Q96RY7 1462 aa9.4□□□□□ -0.91
HTT-211ENST00000513326 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
HTT-211ENST00000513326 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
HTT-211ENST00000513326 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
HTT-211ENST00000513326 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
HTT-211ENST00000513326 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
HTT-211ENST00000513326 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
HTT-211ENST00000513326 PRDM2Q13029 1718 aa9.34□□□□□ -0.92
HTT-211ENST00000513326 RSF1Q96T23 1441 aaPredicted RBP9.33□□□□□ -0.92
HTT-211ENST00000513326 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
HTT-211ENST00000513326 ECM2O94769 699 aaPredicted RBP9.32□□□□□ -0.92
HTT-211ENST00000513326 CLASP1Q7Z460 1538 aa9.29□□□□□ -0.92
HTT-211ENST00000513326 DNMBPQ6XZF7 1577 aa9.28□□□□□ -0.92
HTT-211ENST00000513326 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
HTT-211ENST00000513326 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
HTT-211ENST00000513326 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
HTT-211ENST00000513326 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
HTT-211ENST00000513326 POLA1P09884 1462 aaPredicted RBP9.26□□□□□ -0.93
HTT-211ENST00000513326 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
HTT-211ENST00000513326 SNAPC4Q5SXM2 1469 aa9.25□□□□□ -0.93
HTT-211ENST00000513326 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
HTT-211ENST00000513326 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
HTT-211ENST00000513326 NUBP1P53384 320 aa9.22□□□□□ -0.93
HTT-211ENST00000513326 GSE1Q14687 1217 aa9.22□□□□□ -0.93
HTT-211ENST00000513326 RGL2O15211 777 aa9.2□□□□□ -0.94
HTT-211ENST00000513326 ABCC8Q09428 1581 aa9.2□□□□□ -0.94
HTT-211ENST00000513326 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
HTT-211ENST00000513326 GAPVD1Q14C86 1478 aa9.19□□□□□ -0.94
HTT-211ENST00000513326 ERCC6L2Q5T890 1561 aa9.19□□□□□ -0.94
HTT-211ENST00000513326 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
HTT-211ENST00000513326 SOGA1O94964 1423 aa9.16□□□□□ -0.94
HTT-211ENST00000513326 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
HTT-211ENST00000513326 DCAF8Q5TAQ9 597 aa9.16□□□□□ -0.94
HTT-211ENST00000513326 FAM212AQ96EL1 285 aa9.16□□□□□ -0.94
HTT-211ENST00000513326 FGD5Q6ZNL6 1462 aa9.15□□□□□ -0.94
HTT-211ENST00000513326 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
HTT-211ENST00000513326 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
HTT-211ENST00000513326 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
HTT-211ENST00000513326 SYNJ2O15056 1496 aa9.13□□□□□ -0.95
HTT-211ENST00000513326 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
HTT-211ENST00000513326 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.12□□□□□ -0.95
HTT-211ENST00000513326 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
HTT-211ENST00000513326 CUX1P39880 1505 aa9.11□□□□□ -0.95
HTT-211ENST00000513326 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
HTT-211ENST00000513326 WDR97A6NE52 1622 aa9.1□□□□□ -0.95
HTT-211ENST00000513326 KIF13AQ9H1H9 1805 aa9.1□□□□□ -0.95
HTT-211ENST00000513326 PBRM1Q86U86 1689 aa9.09□□□□□ -0.95
HTT-211ENST00000513326 CHADLQ6NUI6 762 aa9.08□□□□□ -0.96
HTT-211ENST00000513326 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
HTT-211ENST00000513326 CHRM1P11229 460 aaPredicted RBP9.07□□□□□ -0.96
HTT-211ENST00000513326 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
HTT-211ENST00000513326 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
HTT-211ENST00000513326 KDM4FA0A1W2PPD8 638 aa9.06□□□□□ -0.96
HTT-211ENST00000513326 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
HTT-211ENST00000513326 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
HTT-211ENST00000513326 RIOK3O14730 519 aaKnown RBP9.05□□□□□ -0.96
HTT-211ENST00000513326 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.96
HTT-211ENST00000513326 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
HTT-211ENST00000513326 PRKAR2AP13861 404 aaKnown RBP9.04□□□□□ -0.96
HTT-211ENST00000513326 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
HTT-211ENST00000513326 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
HTT-211ENST00000513326 HS6ST3Q8IZP7 471 aa9.03□□□□□ -0.96
HTT-211ENST00000513326 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
HTT-211ENST00000513326 NUP160Q12769 1436 aa9.02□□□□□ -0.97
HTT-211ENST00000513326 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
HTT-211ENST00000513326 PAXIP1Q6ZW49 1069 aaPredicted RBP9.01□□□□□ -0.97
HTT-211ENST00000513326 ADAMTS12P58397 1594 aa9□□□□□ -0.97
HTT-211ENST00000513326 PYGBP11216 843 aa9□□□□□ -0.97
HTT-211ENST00000513326 VGFO15240 615 aaPredicted RBP8.99□□□□□ -0.97
HTT-211ENST00000513326 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
HTT-211ENST00000513326 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms