RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
LINC01258-201ENST00000512517 IGF1RP08069 1367 aa13.03□□□□□ -0.32
LINC01258-201ENST00000512517 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
LINC01258-201ENST00000512517 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
LINC01258-201ENST00000512517 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
LINC01258-201ENST00000512517 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
LINC01258-201ENST00000512517 ERICH3Q5RHP9 1530 aa13□□□□□ -0.33
LINC01258-201ENST00000512517 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
LINC01258-201ENST00000512517 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
LINC01258-201ENST00000512517 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
LINC01258-201ENST00000512517 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
LINC01258-201ENST00000512517 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
LINC01258-201ENST00000512517 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC01258-201ENST00000512517 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
LINC01258-201ENST00000512517 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.34
LINC01258-201ENST00000512517 CUL7Q14999 1698 aa12.96□□□□□ -0.34
LINC01258-201ENST00000512517 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
LINC01258-201ENST00000512517 SUPT16HQ9Y5B9 1047 aaKnown RBP12.93□□□□□ -0.34
LINC01258-201ENST00000512517 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
LINC01258-201ENST00000512517 EIF4G3O43432 1585 aaKnown RBP12.92□□□□□ -0.34
LINC01258-201ENST00000512517 CLIP1P30622 1438 aa12.9□□□□□ -0.34
LINC01258-201ENST00000512517 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
LINC01258-201ENST00000512517 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
LINC01258-201ENST00000512517 ADAMTS12P58397 1594 aa12.85□□□□□ -0.35
LINC01258-201ENST00000512517 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
LINC01258-201ENST00000512517 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
LINC01258-201ENST00000512517 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
LINC01258-201ENST00000512517 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
LINC01258-201ENST00000512517 FBLN2P98095 1184 aa12.81□□□□□ -0.36
LINC01258-201ENST00000512517 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
LINC01258-201ENST00000512517 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.36
LINC01258-201ENST00000512517 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.36
LINC01258-201ENST00000512517 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
LINC01258-201ENST00000512517 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
LINC01258-201ENST00000512517 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
LINC01258-201ENST00000512517 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
LINC01258-201ENST00000512517 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
LINC01258-201ENST00000512517 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
LINC01258-201ENST00000512517 IQGAP2Q13576 1575 aa12.71□□□□□ -0.37
LINC01258-201ENST00000512517 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.38
LINC01258-201ENST00000512517 MIER1Q8N108 512 aa12.7□□□□□ -0.38
LINC01258-201ENST00000512517 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
LINC01258-201ENST00000512517 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
LINC01258-201ENST00000512517 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
LINC01258-201ENST00000512517 CHD1O14646 1710 aa12.68□□□□□ -0.38
LINC01258-201ENST00000512517 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
LINC01258-201ENST00000512517 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
LINC01258-201ENST00000512517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
LINC01258-201ENST00000512517 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
LINC01258-201ENST00000512517 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
LINC01258-201ENST00000512517 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
LINC01258-201ENST00000512517 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
LINC01258-201ENST00000512517 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
LINC01258-201ENST00000512517 PCF11O94913 1555 aaKnown RBP12.61□□□□□ -0.39
LINC01258-201ENST00000512517 NUP160Q12769 1436 aa12.61□□□□□ -0.39
LINC01258-201ENST00000512517 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
LINC01258-201ENST00000512517 MSH5O43196 834 aa12.6□□□□□ -0.39
LINC01258-201ENST00000512517 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
LINC01258-201ENST00000512517 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
LINC01258-201ENST00000512517 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
LINC01258-201ENST00000512517 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
LINC01258-201ENST00000512517 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
LINC01258-201ENST00000512517 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
LINC01258-201ENST00000512517 FYCO1Q9BQS8 1478 aa12.56□□□□□ -0.4
LINC01258-201ENST00000512517 DISP1Q96F81 1524 aa12.56□□□□□ -0.4
LINC01258-201ENST00000512517 KANK4Q5T7N3 995 aaPredicted RBP12.55□□□□□ -0.4
LINC01258-201ENST00000512517 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
LINC01258-201ENST00000512517 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
LINC01258-201ENST00000512517 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
LINC01258-201ENST00000512517 CFAP43Q8NDM7 1665 aa12.52□□□□□ -0.41
LINC01258-201ENST00000512517 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.41
LINC01258-201ENST00000512517 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
LINC01258-201ENST00000512517 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
LINC01258-201ENST00000512517 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
LINC01258-201ENST00000512517 HECW1Q76N89 1606 aa12.49□□□□□ -0.41
LINC01258-201ENST00000512517 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
LINC01258-201ENST00000512517 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
LINC01258-201ENST00000512517 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
LINC01258-201ENST00000512517 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.42
LINC01258-201ENST00000512517 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
LINC01258-201ENST00000512517 CLASP1Q7Z460 1538 aa12.45□□□□□ -0.42
LINC01258-201ENST00000512517 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
LINC01258-201ENST00000512517 CCDC18Q5T9S5 1454 aa12.44□□□□□ -0.42
LINC01258-201ENST00000512517 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
LINC01258-201ENST00000512517 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
LINC01258-201ENST00000512517 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
LINC01258-201ENST00000512517 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
LINC01258-201ENST00000512517 PTPRGP23470 1445 aa12.41□□□□□ -0.42
LINC01258-201ENST00000512517 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
LINC01258-201ENST00000512517 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
LINC01258-201ENST00000512517 GLIPR1L2Q4G1C9 344 aa12.41□□□□□ -0.42
LINC01258-201ENST00000512517 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
LINC01258-201ENST00000512517 NEFLP07196 543 aa12.38□□□□□ -0.43
LINC01258-201ENST00000512517 EHBP1L1Q8N3D4 1523 aa12.38□□□□□ -0.43
LINC01258-201ENST00000512517 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
LINC01258-201ENST00000512517 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
LINC01258-201ENST00000512517 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
LINC01258-201ENST00000512517 ABCA8O94911 1581 aa12.37□□□□□ -0.43
LINC01258-201ENST00000512517 FKBP8Q14318 412 aa12.36□□□□□ -0.43
LINC01258-201ENST00000512517 ITGAEP38570 1179 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms