RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.09
EXOSC9-211ENST00000512454 TOPBP1Q92547 1522 aa14.52□□□□□ -0.09
EXOSC9-211ENST00000512454 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
EXOSC9-211ENST00000512454 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
EXOSC9-211ENST00000512454 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
EXOSC9-211ENST00000512454 WDR62O43379 1518 aa14.48□□□□□ -0.09
EXOSC9-211ENST00000512454 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
EXOSC9-211ENST00000512454 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
EXOSC9-211ENST00000512454 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
EXOSC9-211ENST00000512454 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
EXOSC9-211ENST00000512454 EEA1Q15075 1411 aa14.38□□□□□ -0.11
EXOSC9-211ENST00000512454 SOGA1O94964 1423 aa14.37□□□□□ -0.11
EXOSC9-211ENST00000512454 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
EXOSC9-211ENST00000512454 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
EXOSC9-211ENST00000512454 CUX2O14529 1486 aa14.32□□□□□ -0.12
EXOSC9-211ENST00000512454 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
EXOSC9-211ENST00000512454 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
EXOSC9-211ENST00000512454 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
EXOSC9-211ENST00000512454 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
EXOSC9-211ENST00000512454 FBLN2P98095 1184 aa14.3□□□□□ -0.12
EXOSC9-211ENST00000512454 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
EXOSC9-211ENST00000512454 FAM9AQ8IZU1 332 aaPredicted RBP14.27□□□□□ -0.12
EXOSC9-211ENST00000512454 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
EXOSC9-211ENST00000512454 KIF21BO75037 1637 aa14.25□□□□□ -0.13
EXOSC9-211ENST00000512454 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
EXOSC9-211ENST00000512454 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
EXOSC9-211ENST00000512454 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
EXOSC9-211ENST00000512454 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
EXOSC9-211ENST00000512454 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
EXOSC9-211ENST00000512454 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
EXOSC9-211ENST00000512454 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
EXOSC9-211ENST00000512454 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
EXOSC9-211ENST00000512454 CUL7Q14999 1698 aa14.22□□□□□ -0.13
EXOSC9-211ENST00000512454 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
EXOSC9-211ENST00000512454 GAPVD1Q14C86 1478 aa14.21□□□□□ -0.13
EXOSC9-211ENST00000512454 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
EXOSC9-211ENST00000512454 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
EXOSC9-211ENST00000512454 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
EXOSC9-211ENST00000512454 IGF1RP08069 1367 aa14.16□□□□□ -0.14
EXOSC9-211ENST00000512454 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
EXOSC9-211ENST00000512454 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■□□□□ 10.6
EXOSC9-211ENST00000512454 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
EXOSC9-211ENST00000512454 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
EXOSC9-211ENST00000512454 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
EXOSC9-211ENST00000512454 ADAMTS12P58397 1594 aa14.12□□□□□ -0.15
EXOSC9-211ENST00000512454 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
EXOSC9-211ENST00000512454 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
EXOSC9-211ENST00000512454 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
EXOSC9-211ENST00000512454 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
EXOSC9-211ENST00000512454 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
EXOSC9-211ENST00000512454 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
EXOSC9-211ENST00000512454 FHAD1B1AJZ9 1412 aa14.05□□□□□ -0.16
EXOSC9-211ENST00000512454 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
EXOSC9-211ENST00000512454 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
EXOSC9-211ENST00000512454 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
EXOSC9-211ENST00000512454 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.16
EXOSC9-211ENST00000512454 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
EXOSC9-211ENST00000512454 SYNJ2O15056 1496 aa14□□□□□ -0.17
EXOSC9-211ENST00000512454 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
EXOSC9-211ENST00000512454 CHD1O14646 1710 aa13.98□□□□□ -0.17
EXOSC9-211ENST00000512454 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
EXOSC9-211ENST00000512454 HAX1O00165 279 aa13.96□□□□□ -0.17
EXOSC9-211ENST00000512454 CEP162Q5TB80 1403 aa13.96□□□□□ -0.17
EXOSC9-211ENST00000512454 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
EXOSC9-211ENST00000512454 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
EXOSC9-211ENST00000512454 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
EXOSC9-211ENST00000512454 CLIP1P30622 1438 aa13.89□□□□□ -0.19
EXOSC9-211ENST00000512454 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
EXOSC9-211ENST00000512454 NUP160Q12769 1436 aa13.88□□□□□ -0.19
EXOSC9-211ENST00000512454 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
EXOSC9-211ENST00000512454 EFCAB5A4FU69 1503 aa13.87□□□□□ -0.19
EXOSC9-211ENST00000512454 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
EXOSC9-211ENST00000512454 SAMD9Q5K651 1589 aa13.85□□□□□ -0.19
EXOSC9-211ENST00000512454 EVX2Q03828 476 aa13.83□□□□□ -0.2
EXOSC9-211ENST00000512454 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
EXOSC9-211ENST00000512454 UGGT2Q9NYU1 1516 aa13.82□□□□□ -0.2
EXOSC9-211ENST00000512454 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
EXOSC9-211ENST00000512454 RANGAP1P46060 587 aaPredicted RBP13.79□□□□□ -0.2
EXOSC9-211ENST00000512454 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
EXOSC9-211ENST00000512454 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
EXOSC9-211ENST00000512454 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
EXOSC9-211ENST00000512454 KIAA0556O60303 1618 aa13.76□□□□□ -0.21
EXOSC9-211ENST00000512454 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
EXOSC9-211ENST00000512454 DISP1Q96F81 1524 aa13.74□□□□□ -0.21
EXOSC9-211ENST00000512454 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
EXOSC9-211ENST00000512454 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
EXOSC9-211ENST00000512454 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
EXOSC9-211ENST00000512454 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
EXOSC9-211ENST00000512454 PCF11O94913 1555 aaKnown RBP13.69□□□□□ -0.22
EXOSC9-211ENST00000512454 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
EXOSC9-211ENST00000512454 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
EXOSC9-211ENST00000512454 FYCO1Q9BQS8 1478 aa13.67□□□□□ -0.22
EXOSC9-211ENST00000512454 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
EXOSC9-211ENST00000512454 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
EXOSC9-211ENST00000512454 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
EXOSC9-211ENST00000512454 CFAP43Q8NDM7 1665 aa13.64□□□□□ -0.23
EXOSC9-211ENST00000512454 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
EXOSC9-211ENST00000512454 HECW1Q76N89 1606 aa13.62□□□□□ -0.23
EXOSC9-211ENST00000512454 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
EXOSC9-211ENST00000512454 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms