RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
SLC1A3-211ENST00000512374 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
SLC1A3-211ENST00000512374 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
SLC1A3-211ENST00000512374 CUX1P39880 1505 aa17.5■□□□□ 0.39
SLC1A3-211ENST00000512374 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
SLC1A3-211ENST00000512374 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
SLC1A3-211ENST00000512374 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
SLC1A3-211ENST00000512374 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
SLC1A3-211ENST00000512374 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SLC1A3-211ENST00000512374 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
SLC1A3-211ENST00000512374 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
SLC1A3-211ENST00000512374 PBRM1Q86U86 1689 aa17.33■□□□□ 0.37
SLC1A3-211ENST00000512374 NUP160Q12769 1436 aa17.3■□□□□ 0.36
SLC1A3-211ENST00000512374 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
SLC1A3-211ENST00000512374 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
SLC1A3-211ENST00000512374 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
SLC1A3-211ENST00000512374 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
SLC1A3-211ENST00000512374 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
SLC1A3-211ENST00000512374 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
SLC1A3-211ENST00000512374 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
SLC1A3-211ENST00000512374 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
SLC1A3-211ENST00000512374 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
SLC1A3-211ENST00000512374 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
SLC1A3-211ENST00000512374 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
SLC1A3-211ENST00000512374 CAPN15O75808 1086 aa17.12■□□□□ 0.33
SLC1A3-211ENST00000512374 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
SLC1A3-211ENST00000512374 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
SLC1A3-211ENST00000512374 ERCC6L2Q5T890 1561 aa17.04■□□□□ 0.32
SLC1A3-211ENST00000512374 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
SLC1A3-211ENST00000512374 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
SLC1A3-211ENST00000512374 DSG3P32926 999 aa17■□□□□ 0.31
SLC1A3-211ENST00000512374 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
SLC1A3-211ENST00000512374 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
SLC1A3-211ENST00000512374 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
SLC1A3-211ENST00000512374 IGF1RP08069 1367 aa16.97■□□□□ 0.31
SLC1A3-211ENST00000512374 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
SLC1A3-211ENST00000512374 CUL7Q14999 1698 aa16.96■□□□□ 0.31
SLC1A3-211ENST00000512374 APLP2Q06481 763 aa16.92■□□□□ 0.3
SLC1A3-211ENST00000512374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
SLC1A3-211ENST00000512374 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
SLC1A3-211ENST00000512374 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
SLC1A3-211ENST00000512374 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
SLC1A3-211ENST00000512374 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
SLC1A3-211ENST00000512374 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
SLC1A3-211ENST00000512374 PTPRGP23470 1445 aa16.82■□□□□ 0.28
SLC1A3-211ENST00000512374 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SLC1A3-211ENST00000512374 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
SLC1A3-211ENST00000512374 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
SLC1A3-211ENST00000512374 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
SLC1A3-211ENST00000512374 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
SLC1A3-211ENST00000512374 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
SLC1A3-211ENST00000512374 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
SLC1A3-211ENST00000512374 ABCC2Q92887 1545 aa16.77■□□□□ 0.28
SLC1A3-211ENST00000512374 GLI2P10070 1586 aa16.74■□□□□ 0.27
SLC1A3-211ENST00000512374 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
SLC1A3-211ENST00000512374 ABCB7O75027 752 aa16.72■□□□□ 0.27
SLC1A3-211ENST00000512374 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
SLC1A3-211ENST00000512374 KDM6BO15054 1643 aa16.7■□□□□ 0.26
SLC1A3-211ENST00000512374 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
SLC1A3-211ENST00000512374 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
SLC1A3-211ENST00000512374 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
SLC1A3-211ENST00000512374 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
SLC1A3-211ENST00000512374 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
SLC1A3-211ENST00000512374 ASXL2Q76L83 1435 aa16.65■□□□□ 0.26
SLC1A3-211ENST00000512374 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
SLC1A3-211ENST00000512374 TEX14Q8IWB6 1497 aa16.63■□□□□ 0.25
SLC1A3-211ENST00000512374 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
SLC1A3-211ENST00000512374 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
SLC1A3-211ENST00000512374 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
SLC1A3-211ENST00000512374 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
SLC1A3-211ENST00000512374 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
SLC1A3-211ENST00000512374 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
SLC1A3-211ENST00000512374 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
SLC1A3-211ENST00000512374 PPRC1Q5VV67 1664 aaKnown RBP16.53■□□□□ 0.24
SLC1A3-211ENST00000512374 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
SLC1A3-211ENST00000512374 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
SLC1A3-211ENST00000512374 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
SLC1A3-211ENST00000512374 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
SLC1A3-211ENST00000512374 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
SLC1A3-211ENST00000512374 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
SLC1A3-211ENST00000512374 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
SLC1A3-211ENST00000512374 ABCA8O94911 1581 aa16.45■□□□□ 0.22
SLC1A3-211ENST00000512374 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
SLC1A3-211ENST00000512374 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
SLC1A3-211ENST00000512374 CD109Q6YHK3 1445 aa16.43■□□□□ 0.22
SLC1A3-211ENST00000512374 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
SLC1A3-211ENST00000512374 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
SLC1A3-211ENST00000512374 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
SLC1A3-211ENST00000512374 EEA1Q15075 1411 aa16.38■□□□□ 0.21
SLC1A3-211ENST00000512374 POLA2Q14181 598 aa16.37■□□□□ 0.21
SLC1A3-211ENST00000512374 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
SLC1A3-211ENST00000512374 ATP10BO94823 1461 aa16.31■□□□□ 0.2
SLC1A3-211ENST00000512374 NEO1Q92859 1461 aa16.3■□□□□ 0.2
SLC1A3-211ENST00000512374 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
SLC1A3-211ENST00000512374 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
SLC1A3-211ENST00000512374 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
SLC1A3-211ENST00000512374 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
SLC1A3-211ENST00000512374 ZBTB22O15209 634 aa16.27■□□□□ 0.2
SLC1A3-211ENST00000512374 POTEHQ6S545 545 aa16.27■□□□□ 0.2
SLC1A3-211ENST00000512374 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms