RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 CHD1O14646 1710 aa13.16□□□□□ -0.3
HMGCR-211ENST00000512053 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
HMGCR-211ENST00000512053 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
HMGCR-211ENST00000512053 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
HMGCR-211ENST00000512053 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
HMGCR-211ENST00000512053 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
HMGCR-211ENST00000512053 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
HMGCR-211ENST00000512053 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
HMGCR-211ENST00000512053 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
HMGCR-211ENST00000512053 CUX1P39880 1505 aa13.04□□□□□ -0.32
HMGCR-211ENST00000512053 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
HMGCR-211ENST00000512053 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
HMGCR-211ENST00000512053 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
HMGCR-211ENST00000512053 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
HMGCR-211ENST00000512053 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
HMGCR-211ENST00000512053 ABCB7O75027 752 aa12.91□□□□□ -0.34
HMGCR-211ENST00000512053 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
HMGCR-211ENST00000512053 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
HMGCR-211ENST00000512053 KCNA4P22459 653 aa12.89□□□□□ -0.35
HMGCR-211ENST00000512053 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
HMGCR-211ENST00000512053 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
HMGCR-211ENST00000512053 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
HMGCR-211ENST00000512053 NUP160Q12769 1436 aa12.86□□□□□ -0.35
HMGCR-211ENST00000512053 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
HMGCR-211ENST00000512053 APLP2Q06481 763 aa12.84□□□□□ -0.35
HMGCR-211ENST00000512053 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
HMGCR-211ENST00000512053 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
HMGCR-211ENST00000512053 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
HMGCR-211ENST00000512053 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
HMGCR-211ENST00000512053 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
HMGCR-211ENST00000512053 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
HMGCR-211ENST00000512053 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
HMGCR-211ENST00000512053 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.37
HMGCR-211ENST00000512053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
HMGCR-211ENST00000512053 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
HMGCR-211ENST00000512053 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
HMGCR-211ENST00000512053 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
HMGCR-211ENST00000512053 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
HMGCR-211ENST00000512053 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
HMGCR-211ENST00000512053 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
HMGCR-211ENST00000512053 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
HMGCR-211ENST00000512053 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
HMGCR-211ENST00000512053 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
HMGCR-211ENST00000512053 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
HMGCR-211ENST00000512053 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
HMGCR-211ENST00000512053 IGF1RP08069 1367 aa12.63□□□□□ -0.39
HMGCR-211ENST00000512053 PTPRGP23470 1445 aa12.62□□□□□ -0.39
HMGCR-211ENST00000512053 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
HMGCR-211ENST00000512053 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
HMGCR-211ENST00000512053 DIP2BQ9P265 1576 aa12.58□□□□□ -0.4
HMGCR-211ENST00000512053 ADCY10Q96PN6 1610 aa12.58□□□□□ -0.4
HMGCR-211ENST00000512053 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
HMGCR-211ENST00000512053 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
HMGCR-211ENST00000512053 KDM6BO15054 1643 aa12.57□□□□□ -0.4
HMGCR-211ENST00000512053 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
HMGCR-211ENST00000512053 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
HMGCR-211ENST00000512053 CUL7Q14999 1698 aa12.54□□□□□ -0.4
HMGCR-211ENST00000512053 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
HMGCR-211ENST00000512053 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
HMGCR-211ENST00000512053 POLA2Q14181 598 aa12.5□□□□□ -0.41
HMGCR-211ENST00000512053 ASXL2Q76L83 1435 aa12.5□□□□□ -0.41
HMGCR-211ENST00000512053 UACAQ9BZF9 1416 aa12.48□□□□□ -0.41
HMGCR-211ENST00000512053 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
HMGCR-211ENST00000512053 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
HMGCR-211ENST00000512053 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
HMGCR-211ENST00000512053 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.42
HMGCR-211ENST00000512053 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
HMGCR-211ENST00000512053 GLI2P10070 1586 aa12.43□□□□□ -0.42
HMGCR-211ENST00000512053 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
HMGCR-211ENST00000512053 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
HMGCR-211ENST00000512053 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
HMGCR-211ENST00000512053 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
HMGCR-211ENST00000512053 ADGRL1O94910 1474 aa12.4□□□□□ -0.43
HMGCR-211ENST00000512053 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
HMGCR-211ENST00000512053 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
HMGCR-211ENST00000512053 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
HMGCR-211ENST00000512053 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
HMGCR-211ENST00000512053 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
HMGCR-211ENST00000512053 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
HMGCR-211ENST00000512053 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
HMGCR-211ENST00000512053 CD109Q6YHK3 1445 aa12.33□□□□□ -0.44
HMGCR-211ENST00000512053 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
HMGCR-211ENST00000512053 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
HMGCR-211ENST00000512053 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
HMGCR-211ENST00000512053 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
HMGCR-211ENST00000512053 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
HMGCR-211ENST00000512053 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
HMGCR-211ENST00000512053 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.44
HMGCR-211ENST00000512053 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
HMGCR-211ENST00000512053 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
HMGCR-211ENST00000512053 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
HMGCR-211ENST00000512053 HECW2Q9P2P5 1572 aa12.25□□□□□ -0.45
HMGCR-211ENST00000512053 ABCA8O94911 1581 aa12.22□□□□□ -0.45
HMGCR-211ENST00000512053 PHLDB1Q86UU1 1377 aa12.21□□□□□ -0.45
HMGCR-211ENST00000512053 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
HMGCR-211ENST00000512053 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
HMGCR-211ENST00000512053 CFAP43Q8NDM7 1665 aa12.21□□□□□ -0.45
HMGCR-211ENST00000512053 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
HMGCR-211ENST00000512053 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
HMGCR-211ENST00000512053 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms