RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
TRIO-213ENST00000509354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
TRIO-213ENST00000509354 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
TRIO-213ENST00000509354 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
TRIO-213ENST00000509354 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
TRIO-213ENST00000509354 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
TRIO-213ENST00000509354 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
TRIO-213ENST00000509354 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
TRIO-213ENST00000509354 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
TRIO-213ENST00000509354 GAPVD1Q14C86 1478 aa12.69□□□□□ -0.38
TRIO-213ENST00000509354 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
TRIO-213ENST00000509354 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
TRIO-213ENST00000509354 FBLN2P98095 1184 aa12.66□□□□□ -0.38
TRIO-213ENST00000509354 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
TRIO-213ENST00000509354 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
TRIO-213ENST00000509354 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
TRIO-213ENST00000509354 CLASP1Q7Z460 1538 aa12.65□□□□□ -0.38
TRIO-213ENST00000509354 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
TRIO-213ENST00000509354 APLP2Q06481 763 aa12.64□□□□□ -0.39
TRIO-213ENST00000509354 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
TRIO-213ENST00000509354 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
TRIO-213ENST00000509354 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
TRIO-213ENST00000509354 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
TRIO-213ENST00000509354 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
TRIO-213ENST00000509354 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
TRIO-213ENST00000509354 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
TRIO-213ENST00000509354 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
TRIO-213ENST00000509354 NUP160Q12769 1436 aa12.5□□□□□ -0.41
TRIO-213ENST00000509354 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
TRIO-213ENST00000509354 CUL7Q14999 1698 aa12.49□□□□□ -0.41
TRIO-213ENST00000509354 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
TRIO-213ENST00000509354 RUSC2Q8N2Y8 1516 aa12.48□□□□□ -0.41
TRIO-213ENST00000509354 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
TRIO-213ENST00000509354 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
TRIO-213ENST00000509354 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
TRIO-213ENST00000509354 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
TRIO-213ENST00000509354 IGF1RP08069 1367 aa12.41□□□□□ -0.42
TRIO-213ENST00000509354 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
TRIO-213ENST00000509354 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
TRIO-213ENST00000509354 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
TRIO-213ENST00000509354 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
TRIO-213ENST00000509354 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
TRIO-213ENST00000509354 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
TRIO-213ENST00000509354 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
TRIO-213ENST00000509354 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.44
TRIO-213ENST00000509354 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.44
TRIO-213ENST00000509354 KIF13AQ9H1H9 1805 aa12.26□□□□□ -0.45
TRIO-213ENST00000509354 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
TRIO-213ENST00000509354 CAPN15O75808 1086 aa12.24□□□□□ -0.45
TRIO-213ENST00000509354 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
TRIO-213ENST00000509354 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
TRIO-213ENST00000509354 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
TRIO-213ENST00000509354 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
TRIO-213ENST00000509354 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.46
TRIO-213ENST00000509354 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
TRIO-213ENST00000509354 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
TRIO-213ENST00000509354 CARMIL2Q6F5E8 1435 aa12.16□□□□□ -0.46
TRIO-213ENST00000509354 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
TRIO-213ENST00000509354 MAPKBP1O60336 1514 aa12.15□□□□□ -0.46
TRIO-213ENST00000509354 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
TRIO-213ENST00000509354 PTPRGP23470 1445 aa12.14□□□□□ -0.47
TRIO-213ENST00000509354 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
TRIO-213ENST00000509354 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
TRIO-213ENST00000509354 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
TRIO-213ENST00000509354 KIF21BO75037 1637 aa12.11□□□□□ -0.47
TRIO-213ENST00000509354 EEA1Q15075 1411 aa12.11□□□□□ -0.47
TRIO-213ENST00000509354 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
TRIO-213ENST00000509354 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
TRIO-213ENST00000509354 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
TRIO-213ENST00000509354 UHRF1BP1LA0JNW5 1464 aa12.08□□□□□ -0.47
TRIO-213ENST00000509354 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.47
TRIO-213ENST00000509354 UACAQ9BZF9 1416 aa12.08□□□□□ -0.48
TRIO-213ENST00000509354 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
TRIO-213ENST00000509354 PLB1Q6P1J6 1458 aa12.07□□□□□ -0.48
TRIO-213ENST00000509354 ABCA8O94911 1581 aa12.06□□□□□ -0.48
TRIO-213ENST00000509354 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIO-213ENST00000509354 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
TRIO-213ENST00000509354 ASXL2Q76L83 1435 aa12.04□□□□□ -0.48
TRIO-213ENST00000509354 KDM5BQ9UGL1 1544 aa12.04□□□□□ -0.48
TRIO-213ENST00000509354 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
TRIO-213ENST00000509354 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
TRIO-213ENST00000509354 POLA2Q14181 598 aa12□□□□□ -0.49
TRIO-213ENST00000509354 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
TRIO-213ENST00000509354 MAP3K4Q9Y6R4 1608 aa12□□□□□ -0.49
TRIO-213ENST00000509354 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
TRIO-213ENST00000509354 GLI2P10070 1586 aa11.99□□□□□ -0.49
TRIO-213ENST00000509354 KDM6BO15054 1643 aa11.97□□□□□ -0.49
TRIO-213ENST00000509354 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
TRIO-213ENST00000509354 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
TRIO-213ENST00000509354 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
TRIO-213ENST00000509354 WDR7Q9Y4E6 1490 aa11.96□□□□□ -0.49
TRIO-213ENST00000509354 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
TRIO-213ENST00000509354 ABCB7O75027 752 aa11.94□□□□□ -0.5
TRIO-213ENST00000509354 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
TRIO-213ENST00000509354 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
TRIO-213ENST00000509354 ATP10BO94823 1461 aa11.91□□□□□ -0.5
TRIO-213ENST00000509354 NUP153P49790 1475 aaKnown RBP11.91□□□□□ -0.5
TRIO-213ENST00000509354 DSG3P32926 999 aa11.91□□□□□ -0.5
TRIO-213ENST00000509354 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
TRIO-213ENST00000509354 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms