RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
TOPBP1-207ENST00000509162 CHD1O14646 1710 aa12.74□□□□□ -0.37
TOPBP1-207ENST00000509162 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
TOPBP1-207ENST00000509162 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
TOPBP1-207ENST00000509162 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
TOPBP1-207ENST00000509162 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
TOPBP1-207ENST00000509162 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
TOPBP1-207ENST00000509162 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
TOPBP1-207ENST00000509162 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
TOPBP1-207ENST00000509162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
TOPBP1-207ENST00000509162 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
TOPBP1-207ENST00000509162 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
TOPBP1-207ENST00000509162 APLP2Q06481 763 aa12.61□□□□□ -0.39
TOPBP1-207ENST00000509162 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
TOPBP1-207ENST00000509162 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
TOPBP1-207ENST00000509162 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
TOPBP1-207ENST00000509162 CAPN15O75808 1086 aa12.58□□□□□ -0.4
TOPBP1-207ENST00000509162 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
TOPBP1-207ENST00000509162 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
TOPBP1-207ENST00000509162 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
TOPBP1-207ENST00000509162 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
TOPBP1-207ENST00000509162 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
TOPBP1-207ENST00000509162 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
TOPBP1-207ENST00000509162 NUP160Q12769 1436 aa12.54□□□□□ -0.4
TOPBP1-207ENST00000509162 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
TOPBP1-207ENST00000509162 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
TOPBP1-207ENST00000509162 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
TOPBP1-207ENST00000509162 ERCC6L2Q5T890 1561 aa12.51□□□□□ -0.41
TOPBP1-207ENST00000509162 CUL7Q14999 1698 aa12.51□□□□□ -0.41
TOPBP1-207ENST00000509162 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
TOPBP1-207ENST00000509162 IGF1RP08069 1367 aa12.5□□□□□ -0.41
TOPBP1-207ENST00000509162 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
TOPBP1-207ENST00000509162 DSG3P32926 999 aa12.49□□□□□ -0.41
TOPBP1-207ENST00000509162 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
TOPBP1-207ENST00000509162 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
TOPBP1-207ENST00000509162 FBLN2P98095 1184 aa12.46□□□□□ -0.41
TOPBP1-207ENST00000509162 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
TOPBP1-207ENST00000509162 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
TOPBP1-207ENST00000509162 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
TOPBP1-207ENST00000509162 ZBTB22O15209 634 aa12.4□□□□□ -0.42
TOPBP1-207ENST00000509162 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
TOPBP1-207ENST00000509162 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
TOPBP1-207ENST00000509162 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
TOPBP1-207ENST00000509162 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
TOPBP1-207ENST00000509162 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
TOPBP1-207ENST00000509162 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
TOPBP1-207ENST00000509162 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
TOPBP1-207ENST00000509162 IQGAP2Q13576 1575 aa12.31□□□□□ -0.44
TOPBP1-207ENST00000509162 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
TOPBP1-207ENST00000509162 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
TOPBP1-207ENST00000509162 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.44
TOPBP1-207ENST00000509162 KIF21BO75037 1637 aa12.27□□□□□ -0.44
TOPBP1-207ENST00000509162 ABCB7O75027 752 aa12.27□□□□□ -0.45
TOPBP1-207ENST00000509162 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
TOPBP1-207ENST00000509162 EEA1Q15075 1411 aa12.25□□□□□ -0.45
TOPBP1-207ENST00000509162 ADCY10Q96PN6 1610 aa12.24□□□□□ -0.45
TOPBP1-207ENST00000509162 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
TOPBP1-207ENST00000509162 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
TOPBP1-207ENST00000509162 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
TOPBP1-207ENST00000509162 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
TOPBP1-207ENST00000509162 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
TOPBP1-207ENST00000509162 GOLGA3Q08378 1498 aa12.13□□□□□ -0.47
TOPBP1-207ENST00000509162 POLA2Q14181 598 aa12.12□□□□□ -0.47
TOPBP1-207ENST00000509162 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
TOPBP1-207ENST00000509162 ABCA8O94911 1581 aa12.12□□□□□ -0.47
TOPBP1-207ENST00000509162 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
TOPBP1-207ENST00000509162 PLB1Q6P1J6 1458 aa12.1□□□□□ -0.47
TOPBP1-207ENST00000509162 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
TOPBP1-207ENST00000509162 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
TOPBP1-207ENST00000509162 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
TOPBP1-207ENST00000509162 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
TOPBP1-207ENST00000509162 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
TOPBP1-207ENST00000509162 PTPRGP23470 1445 aa12.09□□□□□ -0.47
TOPBP1-207ENST00000509162 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.48
TOPBP1-207ENST00000509162 DIP2BQ9P265 1576 aa12.07□□□□□ -0.48
TOPBP1-207ENST00000509162 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
TOPBP1-207ENST00000509162 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
TOPBP1-207ENST00000509162 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
TOPBP1-207ENST00000509162 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
TOPBP1-207ENST00000509162 ARHGAP35Q9NRY4 1499 aa12.05□□□□□ -0.48
TOPBP1-207ENST00000509162 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
TOPBP1-207ENST00000509162 RAPGEF6Q8TEU7 1601 aa12.01□□□□□ -0.49
TOPBP1-207ENST00000509162 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
TOPBP1-207ENST00000509162 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
TOPBP1-207ENST00000509162 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
TOPBP1-207ENST00000509162 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
TOPBP1-207ENST00000509162 ASXL2Q76L83 1435 aa11.98□□□□□ -0.49
TOPBP1-207ENST00000509162 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
TOPBP1-207ENST00000509162 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
TOPBP1-207ENST00000509162 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
TOPBP1-207ENST00000509162 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.5
TOPBP1-207ENST00000509162 GLI2P10070 1586 aa11.95□□□□□ -0.5
TOPBP1-207ENST00000509162 EPRSP07814 1512 aaKnown RBP11.95□□□□□ -0.5
TOPBP1-207ENST00000509162 ATP10BO94823 1461 aa11.95□□□□□ -0.5
TOPBP1-207ENST00000509162 RANGAP1P46060 587 aaPredicted RBP11.94□□□□□ -0.5
TOPBP1-207ENST00000509162 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
TOPBP1-207ENST00000509162 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
TOPBP1-207ENST00000509162 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
TOPBP1-207ENST00000509162 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
TOPBP1-207ENST00000509162 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms