RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 CFTRP13569 1480 aa16.42■□□□□ 0.22
COL4A3BP-206ENST00000508809 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
COL4A3BP-206ENST00000508809 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
COL4A3BP-206ENST00000508809 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
COL4A3BP-206ENST00000508809 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
COL4A3BP-206ENST00000508809 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
COL4A3BP-206ENST00000508809 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
COL4A3BP-206ENST00000508809 FKBP8Q14318 412 aa16.28■□□□□ 0.2
COL4A3BP-206ENST00000508809 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
COL4A3BP-206ENST00000508809 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
COL4A3BP-206ENST00000508809 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
COL4A3BP-206ENST00000508809 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
COL4A3BP-206ENST00000508809 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
COL4A3BP-206ENST00000508809 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
COL4A3BP-206ENST00000508809 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
COL4A3BP-206ENST00000508809 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
COL4A3BP-206ENST00000508809 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
COL4A3BP-206ENST00000508809 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
COL4A3BP-206ENST00000508809 PROM2Q8N271 834 aa16.07■□□□□ 0.16
COL4A3BP-206ENST00000508809 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
COL4A3BP-206ENST00000508809 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
COL4A3BP-206ENST00000508809 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
COL4A3BP-206ENST00000508809 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
COL4A3BP-206ENST00000508809 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
COL4A3BP-206ENST00000508809 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
COL4A3BP-206ENST00000508809 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
COL4A3BP-206ENST00000508809 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
COL4A3BP-206ENST00000508809 POTEHQ6S545 545 aa15.96■□□□□ 0.15
COL4A3BP-206ENST00000508809 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
COL4A3BP-206ENST00000508809 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL4A3BP-206ENST00000508809 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
COL4A3BP-206ENST00000508809 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
COL4A3BP-206ENST00000508809 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
COL4A3BP-206ENST00000508809 CHD1O14646 1710 aa15.9■□□□□ 0.14
COL4A3BP-206ENST00000508809 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
COL4A3BP-206ENST00000508809 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-206ENST00000508809 SOGA1O94964 1423 aa15.85■□□□□ 0.13
COL4A3BP-206ENST00000508809 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
COL4A3BP-206ENST00000508809 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
COL4A3BP-206ENST00000508809 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
COL4A3BP-206ENST00000508809 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
COL4A3BP-206ENST00000508809 PLEKHG5O94827 1062 aa15.79■□□□□ 0.12
COL4A3BP-206ENST00000508809 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
COL4A3BP-206ENST00000508809 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
COL4A3BP-206ENST00000508809 CUX1P39880 1505 aa15.75■□□□□ 0.11
COL4A3BP-206ENST00000508809 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
COL4A3BP-206ENST00000508809 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
COL4A3BP-206ENST00000508809 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
COL4A3BP-206ENST00000508809 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
COL4A3BP-206ENST00000508809 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
COL4A3BP-206ENST00000508809 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
COL4A3BP-206ENST00000508809 MIER1Q8N108 512 aa15.69■□□□□ 0.1
COL4A3BP-206ENST00000508809 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
COL4A3BP-206ENST00000508809 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
COL4A3BP-206ENST00000508809 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
COL4A3BP-206ENST00000508809 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
COL4A3BP-206ENST00000508809 FARP1Q9Y4F1 1045 aaPredicted RBP15.63■□□□□ 0.09
COL4A3BP-206ENST00000508809 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
COL4A3BP-206ENST00000508809 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
COL4A3BP-206ENST00000508809 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL4A3BP-206ENST00000508809 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-206ENST00000508809 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
COL4A3BP-206ENST00000508809 HAX1O00165 279 aa15.58■□□□□ 0.08
COL4A3BP-206ENST00000508809 VASPP50552 380 aaPredicted RBP15.56■□□□□ 0.08
COL4A3BP-206ENST00000508809 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
COL4A3BP-206ENST00000508809 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
COL4A3BP-206ENST00000508809 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
COL4A3BP-206ENST00000508809 NUP160Q12769 1436 aa15.5■□□□□ 0.07
COL4A3BP-206ENST00000508809 ERCC6L2Q5T890 1561 aa15.47■□□□□ 0.07
COL4A3BP-206ENST00000508809 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
COL4A3BP-206ENST00000508809 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
COL4A3BP-206ENST00000508809 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
COL4A3BP-206ENST00000508809 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
COL4A3BP-206ENST00000508809 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
COL4A3BP-206ENST00000508809 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
COL4A3BP-206ENST00000508809 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
COL4A3BP-206ENST00000508809 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
COL4A3BP-206ENST00000508809 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
COL4A3BP-206ENST00000508809 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
COL4A3BP-206ENST00000508809 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
COL4A3BP-206ENST00000508809 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
COL4A3BP-206ENST00000508809 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
COL4A3BP-206ENST00000508809 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
COL4A3BP-206ENST00000508809 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
COL4A3BP-206ENST00000508809 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
COL4A3BP-206ENST00000508809 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
COL4A3BP-206ENST00000508809 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
COL4A3BP-206ENST00000508809 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-206ENST00000508809 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
COL4A3BP-206ENST00000508809 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
COL4A3BP-206ENST00000508809 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
COL4A3BP-206ENST00000508809 IGF1RP08069 1367 aa15.23■□□□□ 0.03
COL4A3BP-206ENST00000508809 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
COL4A3BP-206ENST00000508809 EVX2Q03828 476 aa15.22■□□□□ 0.03
COL4A3BP-206ENST00000508809 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.03
COL4A3BP-206ENST00000508809 MAPKBP1O60336 1514 aa15.2■□□□□ 0.02
COL4A3BP-206ENST00000508809 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
COL4A3BP-206ENST00000508809 CLCN6P51797 869 aa15.19■□□□□ 0.02
COL4A3BP-206ENST00000508809 NUBP1P53384 320 aa15.19■□□□□ 0.02
COL4A3BP-206ENST00000508809 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms