RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
COL4A3BP-206ENST00000508809 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
COL4A3BP-206ENST00000508809 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
COL4A3BP-206ENST00000508809 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
COL4A3BP-206ENST00000508809 FOXD1Q16676 465 aa23.43■■□□□ 1.34
COL4A3BP-206ENST00000508809 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
COL4A3BP-206ENST00000508809 ADRA2BP18089 450 aa22.34■■□□□ 1.17
COL4A3BP-206ENST00000508809 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
COL4A3BP-206ENST00000508809 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
COL4A3BP-206ENST00000508809 MSH5O43196 834 aa21.86■■□□□ 1.09
COL4A3BP-206ENST00000508809 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
COL4A3BP-206ENST00000508809 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
COL4A3BP-206ENST00000508809 PPP4R3CPQ6ZMV5 832 aa20.54■□□□□ 0.88
COL4A3BP-206ENST00000508809 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
COL4A3BP-206ENST00000508809 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
COL4A3BP-206ENST00000508809 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
COL4A3BP-206ENST00000508809 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
COL4A3BP-206ENST00000508809 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
COL4A3BP-206ENST00000508809 KCNA4P22459 653 aa19.76■□□□□ 0.75
COL4A3BP-206ENST00000508809 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-206ENST00000508809 ABCC9O60706 1549 aa19.71■□□□□ 0.75
COL4A3BP-206ENST00000508809 HOXD11P31277 338 aaPredicted RBP19.63■□□□□ 0.73
COL4A3BP-206ENST00000508809 NPM3O75607 178 aaKnown RBP19.61■□□□□ 0.73
COL4A3BP-206ENST00000508809 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
COL4A3BP-206ENST00000508809 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
COL4A3BP-206ENST00000508809 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
COL4A3BP-206ENST00000508809 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
COL4A3BP-206ENST00000508809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL4A3BP-206ENST00000508809 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
COL4A3BP-206ENST00000508809 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
COL4A3BP-206ENST00000508809 NACADO15069 1562 aa18.58■□□□□ 0.56
COL4A3BP-206ENST00000508809 SLC4A2P04920 1241 aa18.51■□□□□ 0.55
COL4A3BP-206ENST00000508809 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
COL4A3BP-206ENST00000508809 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
COL4A3BP-206ENST00000508809 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
COL4A3BP-206ENST00000508809 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
COL4A3BP-206ENST00000508809 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
COL4A3BP-206ENST00000508809 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
COL4A3BP-206ENST00000508809 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
COL4A3BP-206ENST00000508809 UNC13AQ9UPW8 1703 aa18.31■□□□□ 0.52
COL4A3BP-206ENST00000508809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
COL4A3BP-206ENST00000508809 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
COL4A3BP-206ENST00000508809 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-206ENST00000508809 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
COL4A3BP-206ENST00000508809 APLP2Q06481 763 aa18.19■□□□□ 0.5
COL4A3BP-206ENST00000508809 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-206ENST00000508809 ZBTB22O15209 634 aa18.09■□□□□ 0.49
COL4A3BP-206ENST00000508809 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
COL4A3BP-206ENST00000508809 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
COL4A3BP-206ENST00000508809 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-206ENST00000508809 CAPN15O75808 1086 aa17.97■□□□□ 0.47
COL4A3BP-206ENST00000508809 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
COL4A3BP-206ENST00000508809 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
COL4A3BP-206ENST00000508809 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
COL4A3BP-206ENST00000508809 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-206ENST00000508809 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
COL4A3BP-206ENST00000508809 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
COL4A3BP-206ENST00000508809 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
COL4A3BP-206ENST00000508809 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
COL4A3BP-206ENST00000508809 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
COL4A3BP-206ENST00000508809 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
COL4A3BP-206ENST00000508809 DSG3P32926 999 aa17.62■□□□□ 0.41
COL4A3BP-206ENST00000508809 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
COL4A3BP-206ENST00000508809 ABCB7O75027 752 aa17.54■□□□□ 0.4
COL4A3BP-206ENST00000508809 POLA2Q14181 598 aa17.44■□□□□ 0.38
COL4A3BP-206ENST00000508809 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
COL4A3BP-206ENST00000508809 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
COL4A3BP-206ENST00000508809 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
COL4A3BP-206ENST00000508809 FBLN2P98095 1184 aa17.11■□□□□ 0.33
COL4A3BP-206ENST00000508809 CUX2O14529 1486 aa17.09■□□□□ 0.33
COL4A3BP-206ENST00000508809 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
COL4A3BP-206ENST00000508809 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
COL4A3BP-206ENST00000508809 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
COL4A3BP-206ENST00000508809 HMGXB3Q12766 1538 aa17■□□□□ 0.31
COL4A3BP-206ENST00000508809 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
COL4A3BP-206ENST00000508809 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
COL4A3BP-206ENST00000508809 NESP48681 1621 aa16.9■□□□□ 0.3
COL4A3BP-206ENST00000508809 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
COL4A3BP-206ENST00000508809 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
COL4A3BP-206ENST00000508809 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
COL4A3BP-206ENST00000508809 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
COL4A3BP-206ENST00000508809 MKRN4PQ13434 485 aaPredicted RBP16.82■□□□□ 0.28
COL4A3BP-206ENST00000508809 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
COL4A3BP-206ENST00000508809 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.27
COL4A3BP-206ENST00000508809 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
COL4A3BP-206ENST00000508809 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
COL4A3BP-206ENST00000508809 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
COL4A3BP-206ENST00000508809 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
COL4A3BP-206ENST00000508809 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
COL4A3BP-206ENST00000508809 KIF21AQ7Z4S6 1674 aa16.67■□□□□ 0.26
COL4A3BP-206ENST00000508809 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
COL4A3BP-206ENST00000508809 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
COL4A3BP-206ENST00000508809 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
COL4A3BP-206ENST00000508809 WIZO95785 1651 aa16.54■□□□□ 0.24
COL4A3BP-206ENST00000508809 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
COL4A3BP-206ENST00000508809 WDR62O43379 1518 aa16.5■□□□□ 0.23
COL4A3BP-206ENST00000508809 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
COL4A3BP-206ENST00000508809 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
COL4A3BP-206ENST00000508809 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
COL4A3BP-206ENST00000508809 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
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