RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PRXQ9BXM0 1461 aa14.37□□□□□ -0.11
USP46-207ENST00000508499 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
USP46-207ENST00000508499 KIF21BO75037 1637 aa14.36□□□□□ -0.11
USP46-207ENST00000508499 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
USP46-207ENST00000508499 CSRNP3Q8WYN3 585 aa14.34□□□□□ -0.11
USP46-207ENST00000508499 CHD1O14646 1710 aa14.33□□□□□ -0.12
USP46-207ENST00000508499 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
USP46-207ENST00000508499 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
USP46-207ENST00000508499 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
USP46-207ENST00000508499 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
USP46-207ENST00000508499 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
USP46-207ENST00000508499 NUP160Q12769 1436 aa14.25□□□□□ -0.13
USP46-207ENST00000508499 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
USP46-207ENST00000508499 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
USP46-207ENST00000508499 GOLGA3Q08378 1498 aa14.22□□□□□ -0.13
USP46-207ENST00000508499 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
USP46-207ENST00000508499 CEP170Q5SW79 1584 aa14.21□□□□□ -0.13
USP46-207ENST00000508499 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
USP46-207ENST00000508499 KIAA0586Q9BVV6 1533 aa14.18□□□□□ -0.14
USP46-207ENST00000508499 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
USP46-207ENST00000508499 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
USP46-207ENST00000508499 IQGAP2Q13576 1575 aa14.15□□□□□ -0.14
USP46-207ENST00000508499 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
USP46-207ENST00000508499 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
USP46-207ENST00000508499 FBLN2P98095 1184 aa14.11□□□□□ -0.15
USP46-207ENST00000508499 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
USP46-207ENST00000508499 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
USP46-207ENST00000508499 EFCAB5A4FU69 1503 aa14.06□□□□□ -0.16
USP46-207ENST00000508499 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.16
USP46-207ENST00000508499 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
USP46-207ENST00000508499 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
USP46-207ENST00000508499 DISP1Q96F81 1524 aa14.01□□□□□ -0.17
USP46-207ENST00000508499 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
USP46-207ENST00000508499 LOC105371045A0A1W2PR82 267 aa13.98□□□□□ -0.17
USP46-207ENST00000508499 PRG4Q92954 1404 aaPredicted RBP13.97□□□□□ -0.17
USP46-207ENST00000508499 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
USP46-207ENST00000508499 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
USP46-207ENST00000508499 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
USP46-207ENST00000508499 CLIP1P30622 1438 aa13.94□□□□□ -0.18
USP46-207ENST00000508499 ERCC6L2Q5T890 1561 aa13.93□□□□□ -0.18
USP46-207ENST00000508499 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
USP46-207ENST00000508499 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
USP46-207ENST00000508499 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
USP46-207ENST00000508499 POTEHQ6S545 545 aa13.9□□□□□ -0.19
USP46-207ENST00000508499 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
USP46-207ENST00000508499 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
USP46-207ENST00000508499 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
USP46-207ENST00000508499 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
USP46-207ENST00000508499 ABCA8O94911 1581 aa13.85□□□□□ -0.19
USP46-207ENST00000508499 UHRF1BP1LA0JNW5 1464 aa13.84□□□□□ -0.19
USP46-207ENST00000508499 PTPRGP23470 1445 aa13.84□□□□□ -0.19
USP46-207ENST00000508499 FHOD3Q2V2M9 1422 aa13.84□□□□□ -0.19
USP46-207ENST00000508499 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
USP46-207ENST00000508499 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
USP46-207ENST00000508499 ABCC2Q92887 1545 aa13.81□□□□□ -0.2
USP46-207ENST00000508499 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
USP46-207ENST00000508499 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
USP46-207ENST00000508499 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
USP46-207ENST00000508499 UACAQ9BZF9 1416 aa13.79□□□□□ -0.2
USP46-207ENST00000508499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP46-207ENST00000508499 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
USP46-207ENST00000508499 PCF11O94913 1555 aaKnown RBP13.78□□□□□ -0.2
USP46-207ENST00000508499 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
USP46-207ENST00000508499 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
USP46-207ENST00000508499 MAP3K1Q13233 1512 aa13.76□□□□□ -0.21
USP46-207ENST00000508499 KDM5BQ9UGL1 1544 aa13.76□□□□□ -0.21
USP46-207ENST00000508499 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
USP46-207ENST00000508499 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
USP46-207ENST00000508499 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
USP46-207ENST00000508499 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
USP46-207ENST00000508499 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
USP46-207ENST00000508499 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
USP46-207ENST00000508499 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
USP46-207ENST00000508499 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
USP46-207ENST00000508499 ATP10BO94823 1461 aa13.68□□□□□ -0.22
USP46-207ENST00000508499 TIAM1Q13009 1591 aa13.68□□□□□ -0.22
USP46-207ENST00000508499 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
USP46-207ENST00000508499 CDK13Q14004 1512 aaKnown RBP13.63□□□□□ -0.23
USP46-207ENST00000508499 KCNA4P22459 653 aa13.63□□□□□ -0.23
USP46-207ENST00000508499 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
USP46-207ENST00000508499 EHBP1L1Q8N3D4 1523 aa13.6□□□□□ -0.23
USP46-207ENST00000508499 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
USP46-207ENST00000508499 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
USP46-207ENST00000508499 CDK11AQ9UQ88 783 aaPredicted RBP13.59□□□□□ -0.23
USP46-207ENST00000508499 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP46-207ENST00000508499 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
USP46-207ENST00000508499 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
USP46-207ENST00000508499 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
USP46-207ENST00000508499 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
USP46-207ENST00000508499 GLI2P10070 1586 aa13.57□□□□□ -0.24
USP46-207ENST00000508499 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
USP46-207ENST00000508499 KIF14Q15058 1648 aa13.56□□□□□ -0.24
USP46-207ENST00000508499 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
USP46-207ENST00000508499 KIF13AQ9H1H9 1805 aa13.54□□□□□ -0.24
USP46-207ENST00000508499 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
USP46-207ENST00000508499 APLP2Q06481 763 aa13.54□□□□□ -0.24
USP46-207ENST00000508499 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
USP46-207ENST00000508499 DSG3P32926 999 aa13.53□□□□□ -0.24
USP46-207ENST00000508499 ABCC10Q5T3U5 1492 aa13.53□□□□□ -0.24
USP46-207ENST00000508499 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms