RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
SH3D19-208ENST00000508492 POTEHQ6S545 545 aa14.22□□□□□ -0.13
SH3D19-208ENST00000508492 PROM2Q8N271 834 aa14.16□□□□□ -0.14
SH3D19-208ENST00000508492 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
SH3D19-208ENST00000508492 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
SH3D19-208ENST00000508492 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
SH3D19-208ENST00000508492 ABCB7O75027 752 aa14.09□□□□□ -0.15
SH3D19-208ENST00000508492 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
SH3D19-208ENST00000508492 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
SH3D19-208ENST00000508492 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
SH3D19-208ENST00000508492 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
SH3D19-208ENST00000508492 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
SH3D19-208ENST00000508492 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
SH3D19-208ENST00000508492 ABCC8Q09428 1581 aa14□□□□□ -0.17
SH3D19-208ENST00000508492 CUX1P39880 1505 aa14□□□□□ -0.17
SH3D19-208ENST00000508492 CHD1O14646 1710 aa13.98□□□□□ -0.17
SH3D19-208ENST00000508492 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
SH3D19-208ENST00000508492 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
SH3D19-208ENST00000508492 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
SH3D19-208ENST00000508492 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
SH3D19-208ENST00000508492 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
SH3D19-208ENST00000508492 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
SH3D19-208ENST00000508492 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
SH3D19-208ENST00000508492 SOGA1O94964 1423 aa13.89□□□□□ -0.19
SH3D19-208ENST00000508492 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
SH3D19-208ENST00000508492 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
SH3D19-208ENST00000508492 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
SH3D19-208ENST00000508492 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
SH3D19-208ENST00000508492 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
SH3D19-208ENST00000508492 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
SH3D19-208ENST00000508492 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
SH3D19-208ENST00000508492 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
SH3D19-208ENST00000508492 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
SH3D19-208ENST00000508492 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
SH3D19-208ENST00000508492 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
SH3D19-208ENST00000508492 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
SH3D19-208ENST00000508492 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
SH3D19-208ENST00000508492 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
SH3D19-208ENST00000508492 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
SH3D19-208ENST00000508492 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
SH3D19-208ENST00000508492 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
SH3D19-208ENST00000508492 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
SH3D19-208ENST00000508492 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
SH3D19-208ENST00000508492 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SH3D19-208ENST00000508492 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
SH3D19-208ENST00000508492 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
SH3D19-208ENST00000508492 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
SH3D19-208ENST00000508492 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
SH3D19-208ENST00000508492 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
SH3D19-208ENST00000508492 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
SH3D19-208ENST00000508492 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
SH3D19-208ENST00000508492 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
SH3D19-208ENST00000508492 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
SH3D19-208ENST00000508492 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
SH3D19-208ENST00000508492 CHMP7Q8WUX9 453 aaPredicted RBP13.63□□□□□ -0.23
SH3D19-208ENST00000508492 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
SH3D19-208ENST00000508492 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SH3D19-208ENST00000508492 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
SH3D19-208ENST00000508492 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
SH3D19-208ENST00000508492 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
SH3D19-208ENST00000508492 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
SH3D19-208ENST00000508492 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
SH3D19-208ENST00000508492 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
SH3D19-208ENST00000508492 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
SH3D19-208ENST00000508492 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
SH3D19-208ENST00000508492 PKD2Q13563 968 aa13.54□□□□□ -0.24
SH3D19-208ENST00000508492 NUP160Q12769 1436 aa13.54□□□□□ -0.24
SH3D19-208ENST00000508492 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
SH3D19-208ENST00000508492 CUL7Q14999 1698 aa13.5□□□□□ -0.25
SH3D19-208ENST00000508492 MIER1Q8N108 512 aa13.49□□□□□ -0.25
SH3D19-208ENST00000508492 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
SH3D19-208ENST00000508492 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
SH3D19-208ENST00000508492 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
SH3D19-208ENST00000508492 IGF1RP08069 1367 aa13.44□□□□□ -0.26
SH3D19-208ENST00000508492 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
SH3D19-208ENST00000508492 PRG4Q92954 1404 aaPredicted RBP13.38□□□□□ -0.27
SH3D19-208ENST00000508492 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
SH3D19-208ENST00000508492 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
SH3D19-208ENST00000508492 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
SH3D19-208ENST00000508492 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
SH3D19-208ENST00000508492 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
SH3D19-208ENST00000508492 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
SH3D19-208ENST00000508492 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
SH3D19-208ENST00000508492 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
SH3D19-208ENST00000508492 IQGAP2Q13576 1575 aa13.31□□□□□ -0.28
SH3D19-208ENST00000508492 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
SH3D19-208ENST00000508492 RAPGEF2Q9Y4G8 1499 aa13.26□□□□□ -0.29
SH3D19-208ENST00000508492 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
SH3D19-208ENST00000508492 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
SH3D19-208ENST00000508492 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
SH3D19-208ENST00000508492 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
SH3D19-208ENST00000508492 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
SH3D19-208ENST00000508492 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
SH3D19-208ENST00000508492 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
SH3D19-208ENST00000508492 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
SH3D19-208ENST00000508492 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
SH3D19-208ENST00000508492 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
SH3D19-208ENST00000508492 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
SH3D19-208ENST00000508492 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
SH3D19-208ENST00000508492 RGL2O15211 777 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms