RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
SH3D19-208ENST00000508492 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
SH3D19-208ENST00000508492 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SH3D19-208ENST00000508492 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
SH3D19-208ENST00000508492 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
SH3D19-208ENST00000508492 FOXD1Q16676 465 aa19.41■□□□□ 0.7
SH3D19-208ENST00000508492 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
SH3D19-208ENST00000508492 MSH5O43196 834 aa18.37■□□□□ 0.53
SH3D19-208ENST00000508492 ADRA2BP18089 450 aa18.21■□□□□ 0.51
SH3D19-208ENST00000508492 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
SH3D19-208ENST00000508492 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
SH3D19-208ENST00000508492 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
SH3D19-208ENST00000508492 KCNA4P22459 653 aa17.43■□□□□ 0.38
SH3D19-208ENST00000508492 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
SH3D19-208ENST00000508492 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
SH3D19-208ENST00000508492 ABCC9O60706 1549 aa17.07■□□□□ 0.32
SH3D19-208ENST00000508492 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
SH3D19-208ENST00000508492 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
SH3D19-208ENST00000508492 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SH3D19-208ENST00000508492 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SH3D19-208ENST00000508492 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
SH3D19-208ENST00000508492 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
SH3D19-208ENST00000508492 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
SH3D19-208ENST00000508492 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
SH3D19-208ENST00000508492 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
SH3D19-208ENST00000508492 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
SH3D19-208ENST00000508492 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
SH3D19-208ENST00000508492 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
SH3D19-208ENST00000508492 NACADO15069 1562 aa16.21■□□□□ 0.18
SH3D19-208ENST00000508492 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
SH3D19-208ENST00000508492 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
SH3D19-208ENST00000508492 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
SH3D19-208ENST00000508492 ZBTB22O15209 634 aa16.02■□□□□ 0.16
SH3D19-208ENST00000508492 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
SH3D19-208ENST00000508492 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
SH3D19-208ENST00000508492 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
SH3D19-208ENST00000508492 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
SH3D19-208ENST00000508492 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
SH3D19-208ENST00000508492 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
SH3D19-208ENST00000508492 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
SH3D19-208ENST00000508492 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
SH3D19-208ENST00000508492 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
SH3D19-208ENST00000508492 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
SH3D19-208ENST00000508492 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
SH3D19-208ENST00000508492 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
SH3D19-208ENST00000508492 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
SH3D19-208ENST00000508492 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
SH3D19-208ENST00000508492 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
SH3D19-208ENST00000508492 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
SH3D19-208ENST00000508492 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
SH3D19-208ENST00000508492 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
SH3D19-208ENST00000508492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
SH3D19-208ENST00000508492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
SH3D19-208ENST00000508492 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
SH3D19-208ENST00000508492 SAMD1Q6SPF0 538 aaPredicted RBP15.08■□□□□ 0
SH3D19-208ENST00000508492 SMARCA4P51532 1647 aa15.07■□□□□ 0
SH3D19-208ENST00000508492 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
SH3D19-208ENST00000508492 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
SH3D19-208ENST00000508492 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
SH3D19-208ENST00000508492 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
SH3D19-208ENST00000508492 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
SH3D19-208ENST00000508492 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
SH3D19-208ENST00000508492 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
SH3D19-208ENST00000508492 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
SH3D19-208ENST00000508492 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
SH3D19-208ENST00000508492 APLP2Q06481 763 aa14.86□□□□□ -0.03
SH3D19-208ENST00000508492 WIZO95785 1651 aa14.82□□□□□ -0.04
SH3D19-208ENST00000508492 FKBP8Q14318 412 aa14.82□□□□□ -0.04
SH3D19-208ENST00000508492 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
SH3D19-208ENST00000508492 NESP48681 1621 aa14.77□□□□□ -0.05
SH3D19-208ENST00000508492 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
SH3D19-208ENST00000508492 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
SH3D19-208ENST00000508492 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
SH3D19-208ENST00000508492 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
SH3D19-208ENST00000508492 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
SH3D19-208ENST00000508492 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
SH3D19-208ENST00000508492 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SH3D19-208ENST00000508492 CUX2O14529 1486 aa14.55□□□□□ -0.08
SH3D19-208ENST00000508492 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
SH3D19-208ENST00000508492 DSG3P32926 999 aa14.52□□□□□ -0.09
SH3D19-208ENST00000508492 CAPN15O75808 1086 aa14.5□□□□□ -0.09
SH3D19-208ENST00000508492 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
SH3D19-208ENST00000508492 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
SH3D19-208ENST00000508492 PRDM2Q13029 1718 aa14.46□□□□□ -0.09
SH3D19-208ENST00000508492 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
SH3D19-208ENST00000508492 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
SH3D19-208ENST00000508492 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
SH3D19-208ENST00000508492 CFTRP13569 1480 aa14.38□□□□□ -0.11
SH3D19-208ENST00000508492 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
SH3D19-208ENST00000508492 WDR62O43379 1518 aa14.37□□□□□ -0.11
SH3D19-208ENST00000508492 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
SH3D19-208ENST00000508492 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
SH3D19-208ENST00000508492 FBLN2P98095 1184 aa14.36□□□□□ -0.11
SH3D19-208ENST00000508492 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
SH3D19-208ENST00000508492 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
SH3D19-208ENST00000508492 POLA2Q14181 598 aa14.31□□□□□ -0.12
SH3D19-208ENST00000508492 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
SH3D19-208ENST00000508492 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
SH3D19-208ENST00000508492 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
SH3D19-208ENST00000508492 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms