RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
SMG7-214ENST00000508461 IGF1RP08069 1367 aa18.13■□□□□ 0.49
SMG7-214ENST00000508461 FKBP8Q14318 412 aa18.13■□□□□ 0.49
SMG7-214ENST00000508461 CUX1P39880 1505 aa18.12■□□□□ 0.49
SMG7-214ENST00000508461 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
SMG7-214ENST00000508461 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
SMG7-214ENST00000508461 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
SMG7-214ENST00000508461 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
SMG7-214ENST00000508461 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
SMG7-214ENST00000508461 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
SMG7-214ENST00000508461 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.48
SMG7-214ENST00000508461 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
SMG7-214ENST00000508461 ARHGAP35Q9NRY4 1499 aa18.06■□□□□ 0.48
SMG7-214ENST00000508461 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
SMG7-214ENST00000508461 CFTRP13569 1480 aa18.04■□□□□ 0.48
SMG7-214ENST00000508461 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
SMG7-214ENST00000508461 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
SMG7-214ENST00000508461 ERICH3Q5RHP9 1530 aa18.01■□□□□ 0.47
SMG7-214ENST00000508461 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
SMG7-214ENST00000508461 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
SMG7-214ENST00000508461 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
SMG7-214ENST00000508461 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
SMG7-214ENST00000508461 ERICH6Q7L0X2 663 aa17.96■□□□□ 0.47
SMG7-214ENST00000508461 FOXD1Q16676 465 aa17.93■□□□□ 0.46
SMG7-214ENST00000508461 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
SMG7-214ENST00000508461 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
SMG7-214ENST00000508461 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
SMG7-214ENST00000508461 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
SMG7-214ENST00000508461 MYT1Q01538 1121 aa17.9■□□□□ 0.46
SMG7-214ENST00000508461 NESP48681 1621 aa17.9■□□□□ 0.46
SMG7-214ENST00000508461 PPP1R15AO75807 674 aaPredicted RBP17.89■□□□□ 0.45
SMG7-214ENST00000508461 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
SMG7-214ENST00000508461 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
SMG7-214ENST00000508461 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
SMG7-214ENST00000508461 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
SMG7-214ENST00000508461 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.445e-7■■□□□ 11.4
SMG7-214ENST00000508461 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
SMG7-214ENST00000508461 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
SMG7-214ENST00000508461 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
SMG7-214ENST00000508461 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
SMG7-214ENST00000508461 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
SMG7-214ENST00000508461 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.43
SMG7-214ENST00000508461 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
SMG7-214ENST00000508461 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
SMG7-214ENST00000508461 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
SMG7-214ENST00000508461 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
SMG7-214ENST00000508461 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
SMG7-214ENST00000508461 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
SMG7-214ENST00000508461 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
SMG7-214ENST00000508461 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.43
SMG7-214ENST00000508461 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.42
SMG7-214ENST00000508461 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.42
SMG7-214ENST00000508461 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
SMG7-214ENST00000508461 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
SMG7-214ENST00000508461 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
SMG7-214ENST00000508461 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
SMG7-214ENST00000508461 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
SMG7-214ENST00000508461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.424e-9■■□□□ 11.6
SMG7-214ENST00000508461 CASKIN1Q8WXD9 1431 aa17.66■□□□□ 0.42
SMG7-214ENST00000508461 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
SMG7-214ENST00000508461 TSHZ2Q9NRE2 1034 aa17.66■□□□□ 0.42
SMG7-214ENST00000508461 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
SMG7-214ENST00000508461 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■□ 20.5
SMG7-214ENST00000508461 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
SMG7-214ENST00000508461 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
SMG7-214ENST00000508461 ZNF644Q9H582 1327 aaPredicted RBP17.62■□□□□ 0.41
SMG7-214ENST00000508461 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
SMG7-214ENST00000508461 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
SMG7-214ENST00000508461 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
SMG7-214ENST00000508461 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
SMG7-214ENST00000508461 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
SMG7-214ENST00000508461 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
SMG7-214ENST00000508461 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
SMG7-214ENST00000508461 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
SMG7-214ENST00000508461 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
SMG7-214ENST00000508461 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
SMG7-214ENST00000508461 PKD2Q13563 968 aa17.54■□□□□ 0.4
SMG7-214ENST00000508461 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
SMG7-214ENST00000508461 CARD11Q9BXL7 1154 aa17.52■□□□□ 0.4
SMG7-214ENST00000508461 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
SMG7-214ENST00000508461 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
SMG7-214ENST00000508461 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
SMG7-214ENST00000508461 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
SMG7-214ENST00000508461 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
SMG7-214ENST00000508461 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
SMG7-214ENST00000508461 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
SMG7-214ENST00000508461 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
SMG7-214ENST00000508461 NAIPQ13075 1403 aa17.47■□□□□ 0.39
SMG7-214ENST00000508461 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
SMG7-214ENST00000508461 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
SMG7-214ENST00000508461 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
SMG7-214ENST00000508461 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
SMG7-214ENST00000508461 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
SMG7-214ENST00000508461 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■□□□□ 8.9
SMG7-214ENST00000508461 JPH4Q96JJ6 628 aa17.42■□□□□ 0.38
SMG7-214ENST00000508461 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
SMG7-214ENST00000508461 NUP155O75694 1391 aa17.41■□□□□ 0.38
SMG7-214ENST00000508461 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
SMG7-214ENST00000508461 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
SMG7-214ENST00000508461 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms