RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 IGF1RP08069 1367 aa18.1■□□□□ 0.49
DDR1-262ENST00000508312 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
DDR1-262ENST00000508312 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
DDR1-262ENST00000508312 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
DDR1-262ENST00000508312 NESP48681 1621 aa18.07■□□□□ 0.48
DDR1-262ENST00000508312 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
DDR1-262ENST00000508312 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
DDR1-262ENST00000508312 FGD5Q6ZNL6 1462 aa18.05■□□□□ 0.48
DDR1-262ENST00000508312 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
DDR1-262ENST00000508312 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
DDR1-262ENST00000508312 ERICH3Q5RHP9 1530 aa18.01■□□□□ 0.47
DDR1-262ENST00000508312 MSH5O43196 834 aa18.01■□□□□ 0.47
DDR1-262ENST00000508312 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
DDR1-262ENST00000508312 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
DDR1-262ENST00000508312 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
DDR1-262ENST00000508312 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
DDR1-262ENST00000508312 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
DDR1-262ENST00000508312 PHLDB1Q86UU1 1377 aa17.92■□□□□ 0.46
DDR1-262ENST00000508312 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
DDR1-262ENST00000508312 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
DDR1-262ENST00000508312 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
DDR1-262ENST00000508312 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
DDR1-262ENST00000508312 DEKP35659 375 aaKnown RBP17.86■□□□□ 0.45
DDR1-262ENST00000508312 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
DDR1-262ENST00000508312 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
DDR1-262ENST00000508312 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
DDR1-262ENST00000508312 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
DDR1-262ENST00000508312 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
DDR1-262ENST00000508312 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.44
DDR1-262ENST00000508312 CHIC2Q9UKJ5 165 aa17.77■□□□□ 0.43
DDR1-262ENST00000508312 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
DDR1-262ENST00000508312 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
DDR1-262ENST00000508312 NBR1Q14596 966 aa17.75■□□□□ 0.43
DDR1-262ENST00000508312 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
DDR1-262ENST00000508312 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
DDR1-262ENST00000508312 SETD5Q9C0A6 1442 aa17.71■□□□□ 0.43
DDR1-262ENST00000508312 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
DDR1-262ENST00000508312 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
DDR1-262ENST00000508312 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
DDR1-262ENST00000508312 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
DDR1-262ENST00000508312 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
DDR1-262ENST00000508312 MTUS2Q5JR59 1369 aa17.67■□□□□ 0.42
DDR1-262ENST00000508312 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
DDR1-262ENST00000508312 ANP32CO43423 234 aa17.64■□□□□ 0.41
DDR1-262ENST00000508312 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
DDR1-262ENST00000508312 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
DDR1-262ENST00000508312 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
DDR1-262ENST00000508312 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
DDR1-262ENST00000508312 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
DDR1-262ENST00000508312 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
DDR1-262ENST00000508312 FOXD1Q16676 465 aa17.62■□□□□ 0.41
DDR1-262ENST00000508312 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
DDR1-262ENST00000508312 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.415e-8■■■■■ 51
DDR1-262ENST00000508312 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
DDR1-262ENST00000508312 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.41
DDR1-262ENST00000508312 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
DDR1-262ENST00000508312 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDR1-262ENST00000508312 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
DDR1-262ENST00000508312 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
DDR1-262ENST00000508312 FBLN2P98095 1184 aa17.53■□□□□ 0.4
DDR1-262ENST00000508312 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
DDR1-262ENST00000508312 FGD6Q6ZV73 1430 aa17.53■□□□□ 0.4
DDR1-262ENST00000508312 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
DDR1-262ENST00000508312 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
DDR1-262ENST00000508312 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
DDR1-262ENST00000508312 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
DDR1-262ENST00000508312 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
DDR1-262ENST00000508312 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
DDR1-262ENST00000508312 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
DDR1-262ENST00000508312 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
DDR1-262ENST00000508312 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
DDR1-262ENST00000508312 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
DDR1-262ENST00000508312 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
DDR1-262ENST00000508312 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
DDR1-262ENST00000508312 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
DDR1-262ENST00000508312 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
DDR1-262ENST00000508312 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.39
DDR1-262ENST00000508312 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
DDR1-262ENST00000508312 CFAP43Q8NDM7 1665 aa17.45■□□□□ 0.38
DDR1-262ENST00000508312 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
DDR1-262ENST00000508312 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
DDR1-262ENST00000508312 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
DDR1-262ENST00000508312 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
DDR1-262ENST00000508312 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
DDR1-262ENST00000508312 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
DDR1-262ENST00000508312 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
DDR1-262ENST00000508312 CTTNBP2Q8WZ74 1663 aa17.4■□□□□ 0.38
DDR1-262ENST00000508312 EFCAB5A4FU69 1503 aa17.4■□□□□ 0.38
DDR1-262ENST00000508312 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
DDR1-262ENST00000508312 CUL7Q14999 1698 aa17.38■□□□□ 0.37
DDR1-262ENST00000508312 NAIPQ13075 1403 aa17.38■□□□□ 0.37
DDR1-262ENST00000508312 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
DDR1-262ENST00000508312 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
DDR1-262ENST00000508312 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
DDR1-262ENST00000508312 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
DDR1-262ENST00000508312 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
DDR1-262ENST00000508312 ANP32AP39687 249 aaKnown RBP17.35■□□□□ 0.37
DDR1-262ENST00000508312 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
DDR1-262ENST00000508312 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
DDR1-262ENST00000508312 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms